RNA id: TU11081



Basic Information


Item Value
RNA id TU11081
length 383
RNA type TUCP
GC content 0.62
exon number 2
gene id G7508
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28391039 ~ 28392053 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAGACGATGACTTCAACACCTACAGCGTGTGATCTGAGGATCGTCCTTCTGGGGAAAACCGGATCAGGAAAAAGTGCAGCGGGAAACACCATCCTGGgcaaaaatgtctttgaagTTGCCGATTTCATAAAATCGACCAATAAACTGTGTGAGAAACAGGAGGGAGTAGTTGACGGAAAGACCGTGTCTATAATTGACACTCCAGGGCTGTTTAACACAGCTATGAATAAACAGCAGCTGAAGGCTGAATTAGAAAAGTGTGTAGAGATGTGCTCTCCTGGTCCTCATGTGTTTCTGCTGGTGCTAAAGCTGGGTGTGAGATTCACAAAAGAGGAGAGAAACACTGTCAAACTGATTTGGGAGAACTTTGGAGAAGAAGCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11036 lncRNA downstream 105705 28264397 ~ 28285334 (-) True G7480
TU10641 lncRNA downstream 151344 28238856 ~ 28239695 (-) True G7238
TU10636 lncRNA downstream 167809 28222256 ~ 28223230 (-) False nxnl1
TU10557 lncRNA downstream 276112 28109682 ~ 28114927 (-) True G7182
TU10548 lncRNA downstream 316733 28073917 ~ 28074306 (-) False LOC122349330
TU11095 lncRNA upstream 16189 28408242 ~ 28410308 (-) True G7516
TU11096 lncRNA upstream 22899 28414952 ~ 28417571 (-) True LOC122326209
XR_006247450.1 lncRNA upstream 23390 28415443 ~ 28417536 (-) False LOC122326209
TU11100 lncRNA upstream 39270 28431323 ~ 28431628 (-) True G7521
XR_006247505.1 lncRNA upstream 96528 28488581 ~ 28489509 (-) True LOC122326719
XM_043254998.1 mRNA downstream 8164 28376999 ~ 28382875 (-) True LOC122356343
XM_043262004.1 mRNA downstream 67023 28321180 ~ 28324016 (-) False LOC122360989
XM_043261924.1 mRNA downstream 67023 28321180 ~ 28324016 (-) True LOC122360989
XM_043262114.1 mRNA downstream 67023 28321369 ~ 28324016 (-) False LOC122360989
XM_043262075.1 mRNA downstream 67023 28321369 ~ 28324016 (-) False LOC122360989
XM_043245516.1 mRNA upstream 94715 28486768 ~ 28488502 (-) True LOC122349470
XM_043245530.1 mRNA upstream 101643 28493696 ~ 28496147 (-) True LOC122349476
XM_043245543.1 mRNA upstream 104217 28496270 ~ 28506538 (-) True LOC122349482
XM_043255903.1 mRNA upstream 193764 28585817 ~ 28611362 (-) False LOC122356751
XM_043255970.1 mRNA upstream 193764 28585817 ~ 28596121 (-) False LOC122356751
TU11020 other downstream 142516 28244128 ~ 28248523 (-) True G7475
TU10496 other downstream 314595 28074648 ~ 28076444 (-) False LOC122349330
TU10417 other downstream 451587 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 451587 27754782 ~ 27939452 (-) False G7105
XR_006250838.1 other downstream 1135972 27241224 ~ 27255067 (-) False LOC122343833
TU11094 other upstream 14129 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 131652 28523705 ~ 28525551 (-) True G7527
TU11178 other upstream 657690 29049743 ~ 29128775 (-) False G7563
TU11179 other upstream 657690 29049743 ~ 29128775 (-) True G7563
TU11196 other upstream 714261 29106314 ~ 29112734 (-) True LOC122325037

Expression Profile