RNA id: TU11094



Basic Information


Item Value
RNA id TU11094
length 652
RNA type TUCP
GC content 0.41
exon number 4
gene id G7515
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28406182 ~ 28446591 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cacacacaccttgttgTCCATGTTGGCGAGGCTGCAGTTGCACTCGGTGGCGCCGTAAAACTCGCCGATGCGACTGATGTTAAAACGCTTCATAAACGCTTCCCAGACGTTGGGCCGCAGACCGTTGCCCATAGCAACACGCACCTGGTGACGAGACTCGGACGGGCGGCCCGGCTGAGATAACAGATAACGACAGATCTCCCCGATGTACTGCACGGTGGTGCAGTACATCGGGGAGATCTGTCGTTATCTGTTATCTCAGCCGGGCCGCCCGTCCGAGTCTCGTCACCAGGTGCGTGTTGCTATGGGCAACGGTCTGCGGCCCAACGTCTGGGAAGCGTTTATGAAGCGTTTTAACATCAGTCGCATCAGGCGAGTTTTACGCGGCGCCACCGAGTGCAACTGCAGCCTCGCCAACATGGAcaacaagGTGGGGTCGTGCGGCTTCAACAGCGTGATCCTGCCCAGCGTTTATCCCATCAGACTGCTGAGAGCAGACGAGGACACCATGGAGTTAGTGCGGGACAGTCGAGGCTGTGTGCCGCAAACCAGTGCAAACCAGGGGAACCAGGGATCATCGTTGGCCGAATCAATCCTCAGGATCCATTGCGTCGTTTTGATGGCTACGCCAATCAAGAGGCCACCAGCAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11036 lncRNA downstream 120848 28264397 ~ 28285334 (-) True G7480
TU10641 lncRNA downstream 166487 28238856 ~ 28239695 (-) True G7238
TU10636 lncRNA downstream 182952 28222256 ~ 28223230 (-) False nxnl1
TU10557 lncRNA downstream 291255 28109682 ~ 28114927 (-) True G7182
TU10548 lncRNA downstream 331876 28073917 ~ 28074306 (-) False LOC122349330
XR_006247505.1 lncRNA upstream 41990 28488581 ~ 28489509 (-) True LOC122326719
TU11120 lncRNA upstream 224330 28670921 ~ 28672634 (-) True G7535
TU11130 lncRNA upstream 296853 28743444 ~ 28793591 (-) False G7541
TU11132 lncRNA upstream 296853 28743444 ~ 28784099 (-) False G7541
TU11133 lncRNA upstream 296853 28743444 ~ 28807706 (-) True G7541
XM_043254998.1 mRNA downstream 23307 28376999 ~ 28382875 (-) True LOC122356343
XM_043262004.1 mRNA downstream 82166 28321180 ~ 28324016 (-) False LOC122360989
XM_043245516.1 mRNA upstream 40177 28486768 ~ 28488502 (-) True LOC122349470
XM_043245530.1 mRNA upstream 47105 28493696 ~ 28496147 (-) True LOC122349476
XM_043245543.1 mRNA upstream 49679 28496270 ~ 28506538 (-) True LOC122349482
XM_043255903.1 mRNA upstream 139226 28585817 ~ 28611362 (-) False LOC122356751
XM_043255970.1 mRNA upstream 139226 28585817 ~ 28596121 (-) False LOC122356751
TU11081 other downstream 14129 28391039 ~ 28392053 (-) True G7508
TU11020 other downstream 157659 28244128 ~ 28248523 (-) True G7475
TU10496 other downstream 329738 28074648 ~ 28076444 (-) False LOC122349330
TU10417 other downstream 466730 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 466730 27754782 ~ 27939452 (-) False G7105
TU11106 other upstream 77114 28523705 ~ 28525551 (-) True G7527
TU11178 other upstream 603152 29049743 ~ 29128775 (-) False G7563
TU11179 other upstream 603152 29049743 ~ 29128775 (-) True G7563
TU11196 other upstream 659723 29106314 ~ 29112734 (-) True LOC122325037
TU11164 other upstream 680180 29126771 ~ 29128775 (-) False G7563

Expression Profile