RNA id: XM_043218715.1



Basic Information


Item Value
RNA id XM_043218715.1
length 856
RNA type mRNA
GC content 0.43
exon number 5
gene id LOC122324333
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28942988 ~ 28944618 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAACAATCAAGCAGTCAGAGAGTCTGAAGATAATTATACAGatcttgttttgtctttttcctcATCAGCTCTGTTCCTGGAGTTTAGTGACTCTCATAAATGTGACATTGGACACGAAAGAAGAAACAACAGCTGTATTGATACAGATGAGTGTGTGATGATTCCAGATGTGTGTGGAGCACACGCTCAGTGTTTTAATACACATGGAAGTTACTACTGCACCTGCAATGAAGGCTTTCAGTCAAAAACAGCCAACTTCACAGCAATAACGGGAGAGTGCGAGGATATCAATGAGTGTTTCATGAACACACATGGATGCTCAGATGATAAGGTGTGTATGAACACTTTAGGCTCCTACGAATGCAGGTGTAGAAATGGATACCAGCTCACAAGAACGGACGCAGGATGTGAAGATATCGACGAGTGTTCAGATCCAGATGTTTGTGGCGCAAACGCGGACTGCGACAATCATCCCGGCAGCTACAGCTGCAGATGTCACCAGGGTTACAGTAACTATGGCAACGACCAGTCAGAATGCAGTGAGACGCGTTTCTGTCTGACTGATGAATAAACGTCTCATTGGCCCATGATGTCATCAGCTTTCTGGAGAACGGATCAGctgttattttgattatttcatgTTTGAATGACCACTTCCTCTTTTTTCTTCACCAATATAATTCAGAAAGCGACCTTTTTGTGTGGTTCTTTTTTTGGTGCGTAGCTCTCTGTCATTTCATTTCGAATGTGCTTTACTTACACGACAAATCTGACGAATCTCTGTTTCTATAGGCTTGTTGTAAGACTTGAAATGCTAAAACCAGTGGTGAAGATGTAGGCTAGCAGATGATGAACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11133 lncRNA downstream 135282 28743444 ~ 28807706 (-) True G7541
TU11146 lncRNA downstream 141323 28792644 ~ 28801665 (-) True G7551
TU11145 lncRNA downstream 142132 28790466 ~ 28800856 (-) True G7550
TU11130 lncRNA downstream 149397 28743444 ~ 28793591 (-) False G7541
TU11132 lncRNA downstream 158889 28743444 ~ 28784099 (-) False G7541
TU11205 lncRNA upstream 27284 28971894 ~ 28981118 (-) True G7579
TU11218 lncRNA upstream 71055 29015665 ~ 29017156 (-) True G7591
TU11223 lncRNA upstream 123372 29067982 ~ 29134568 (-) False LOC122362981
TU11231 lncRNA upstream 123372 29067982 ~ 29152545 (-) False LOC122362981
TU11165 lncRNA upstream 133501 29078111 ~ 29131947 (-) False G7563
XM_043257816.1 mRNA downstream 1074 28929703 ~ 28941914 (-) False LOC122357989
XM_043257734.1 mRNA downstream 1075 28929703 ~ 28941913 (-) True LOC122357989
XM_043260208.1 mRNA downstream 14408 28924616 ~ 28928580 (-) True LOC122359935
XM_043257929.1 mRNA downstream 18484 28914998 ~ 28924504 (-) True LOC122358117
XM_043220034.1 mRNA downstream 29130 28899713 ~ 28913858 (-) True LOC122325105
XM_043261792.1 mRNA upstream 11697 28956307 ~ 28961850 (-) True LOC122360916
XM_043216835.1 mRNA upstream 93112 29037722 ~ 29043291 (-) True LOC122323133
XM_043219713.1 mRNA upstream 106164 29050774 ~ 29061674 (-) False dnm2b
XM_043219627.1 mRNA upstream 106164 29050774 ~ 29061674 (-) True dnm2b
XM_043219793.1 mRNA upstream 106164 29050774 ~ 29061674 (-) False dnm2b
TU11106 other downstream 417437 28523705 ~ 28525551 (-) True G7527
TU11094 other downstream 496397 28406182 ~ 28446591 (-) True G7515
TU11081 other downstream 550935 28391039 ~ 28392053 (-) True G7508
TU11020 other downstream 694465 28244128 ~ 28248523 (-) True G7475
TU10496 other downstream 866544 28074648 ~ 28076444 (-) False LOC122349330
TU11178 other upstream 105133 29049743 ~ 29128775 (-) False G7563
TU11179 other upstream 105133 29049743 ~ 29128775 (-) True G7563
TU11196 other upstream 161704 29106314 ~ 29112734 (-) True LOC122325037
TU11164 other upstream 182161 29126771 ~ 29128775 (-) False G7563
TU11174 other upstream 182161 29126771 ~ 29128775 (-) False G7563

Expression Profile