RNA id: TU11164



Basic Information


Item Value
RNA id TU11164
length 719
RNA type TUCP
GC content 0.44
exon number 6
gene id G7563
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29049743 ~ 29132092 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCAGATGTGAGCGGACGTTTACTTCACGGCACTGGTTTACGGCAAACGCCTGCGTGAGTAACGCGTCTGATTATCTGCGGGAACAAACGACAAAAATCAGagatgATTGAGGTGGTTTGTAATGATCGTCTGGGGAAGAAGGTTCGGGTCAAATGCAATCAGGAGGACACGATCGGAGACCTGAAGAAGCTGATCGCAGCGCAGACCGGCACTCGGTGGGATAAGATCGTGTTGAAGAAGTGGTACACCATATTCAAGGACCACGTGTCGCTGGGAGACTATGAGATCCATGACGGCATGAACCTCGAGCTCTATTAtcagtagaaacacacacacagacacacacacagacagacagacagacacacacacacacacacacagacacacacacacagacacacacacacacacacagacacacacacacacacagacacacacacagacacagacacacacacagagtttgtGGAGCGGGTTGTTTTCATCATGTCTCGAGGCATCAGAATATTTGTTCCGTTGTATTGTTTTGATATTGTTTGGAAATAAAACTCATATTTATGTACAGCCACGTCTGTGATTGTTGAACAGAACAATGCTTTTCAAACCACTTTAATGAGAATGTGAAGAAAACACAGCTGGTTACGATCAGGACTCGGTCTGGACGGAGGCTGTTGATTGGTCAGCAGTAATCTGAATGCTCCTCCTCCACGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11201 lncRNA downstream 2719 29115496 ~ 29124052 (-) True G7575
TU11218 lncRNA downstream 109615 29015665 ~ 29017156 (-) True G7591
TU11205 lncRNA downstream 145653 28971894 ~ 28981118 (-) True G7579
TU11154 lncRNA downstream 182153 28943997 ~ 28944618 (-) False LOC122324333
TU11146 lncRNA downstream 325106 28792644 ~ 28801665 (-) True G7551
TU11224 lncRNA upstream 3693 29132468 ~ 29152545 (-) False LOC122362981
TU11200 lncRNA upstream 28069 29156844 ~ 29158718 (-) True G7574
TU11289 lncRNA upstream 161986 29290761 ~ 29291343 (-) True G7620
TU11294 lncRNA upstream 163851 29292626 ~ 29293410 (-) True G7624
TU11194 lncRNA upstream 173032 29301807 ~ 29302889 (-) False G7569
XM_043219910.1 mRNA downstream 15058 29101686 ~ 29111713 (-) False LOC122325037
XM_043218371.1 mRNA downstream 35997 29089146 ~ 29090774 (-) True LOC122324118
XM_043216551.1 mRNA downstream 38178 29085844 ~ 29088593 (-) True LOC122322914
XM_043255514.1 mRNA downstream 41313 29076419 ~ 29085458 (-) False LOC122356586
XM_043255602.1 mRNA downstream 41624 29076419 ~ 29085147 (-) True LOC122356586
XM_043264857.1 mRNA upstream 5169 29133944 ~ 29137075 (-) True LOC122362981
XM_043264977.1 mRNA upstream 10667 29139442 ~ 29141023 (-) True LOC122363056
XM_043260324.1 mRNA upstream 36327 29165102 ~ 29169899 (-) True wu:fk65c09
XM_043253734.1 mRNA upstream 41867 29170642 ~ 29182688 (-) False LOC122355388
XM_043253649.1 mRNA upstream 41867 29170642 ~ 29182688 (-) True LOC122355388
TU11196 other downstream 14037 29106314 ~ 29112734 (-) True LOC122325037
TU11106 other downstream 601220 28523705 ~ 28525551 (-) True G7527
TU11094 other downstream 680180 28406182 ~ 28446591 (-) True G7515
TU11081 other downstream 734718 28391039 ~ 28392053 (-) True G7508
TU11020 other downstream 878248 28244128 ~ 28248523 (-) True G7475
TU11193 other upstream 173032 29301807 ~ 29310598 (-) True G7569
TU11395 other upstream 297519 29426294 ~ 29434213 (-) False LOC122354733
TU11364 other upstream 317176 29445951 ~ 29461849 (-) False G7648
TU11407 other upstream 323984 29452759 ~ 29475388 (-) True G7655
TU11359 other upstream 328740 29457515 ~ 29473561 (-) True G7648

Expression Profile