RNA id: TU11218



Basic Information


Item Value
RNA id TU11218
length 689
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G7591
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29015665 ~ 29017156 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAATAACGAGGGAGGCGGGGCCAATAAACGTCCAGATGAAGTAGTTATCAACCCTCAACCAGCAACTACACAAGACAAGAGagaaatatcacacacacacacacacagagctatCCCTCGGGAGACGTGCGGGTGAAACACACTCACGCTTTGGGTCCTCCGTAGCTCCTGTAGTCGATGGCTGTGGAGATGGCCACCACCAGCGTTGGGAAGCCGTACGCAGAGAGGTAGTAGTACTTCCGGCGAGACGTCTCGCTCTCAAACACCTCCACCATCAGCACATAGAGCTGCACCGTCTCCATGCAGAGCCAGCAGAACACGGACAGCAGGAAGAAGTGCAGCAGAAGGTGGAGATGCACAGAGCCAGACACACCAGAGAGATCACCATCCCCACCCACGTGATGACGAACAGGATCAGACCCTGCACACCGCCAGGGTACTGACGCCGGAAGAACAACGTTAATGACTGAGGGgttaaacgtgtgtgtgtgtgtgtgtgtgcgtgtgtgagactCACGGCAGGCTGCTGGTGGTTCATGAGCACGGCGAAGTTGGTCAGATGCGAGCAGGCgcaggtggtgtgtgtgttgttgctGTGCAGACGTCTGCAGCCGTGCGAGGACCACTGACCCGTCATCGAGCGCTCCGAGTAATTCCAGAACGAACAGTTGGGATTGTAGTGATTCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11205 lncRNA downstream 34547 28971894 ~ 28981118 (-) True G7579
TU11154 lncRNA downstream 71047 28943997 ~ 28944618 (-) False LOC122324333
TU11133 lncRNA downstream 207959 28743444 ~ 28807706 (-) True G7541
TU11223 lncRNA upstream 50826 29067982 ~ 29134568 (-) False LOC122362981
TU11231 lncRNA upstream 50826 29067982 ~ 29152545 (-) False LOC122362981
TU11165 lncRNA upstream 60955 29078111 ~ 29131947 (-) False G7563
TU11167 lncRNA upstream 97862 29115018 ~ 29131947 (-) False G7563
TU11201 lncRNA upstream 98340 29115496 ~ 29124052 (-) True G7575
XM_043261792.1 mRNA downstream 53815 28956307 ~ 28961850 (-) True LOC122360916
XM_043218715.1 mRNA downstream 71055 28942988 ~ 28944610 (-) True LOC122324333
XM_043257816.1 mRNA downstream 73751 28929703 ~ 28941914 (-) False LOC122357989
XM_043257734.1 mRNA downstream 73752 28929703 ~ 28941913 (-) True LOC122357989
XM_043260208.1 mRNA downstream 87085 28924616 ~ 28928580 (-) True LOC122359935
XM_043216835.1 mRNA upstream 20566 29037722 ~ 29043291 (-) True LOC122323133
XM_043219713.1 mRNA upstream 33618 29050774 ~ 29061674 (-) False dnm2b
XM_043219627.1 mRNA upstream 33618 29050774 ~ 29061674 (-) True dnm2b
XM_043219793.1 mRNA upstream 33618 29050774 ~ 29061674 (-) False dnm2b
XM_043219544.1 mRNA upstream 33619 29050775 ~ 29061674 (-) False dnm2b
TU11106 other downstream 490114 28523705 ~ 28525551 (-) True G7527
TU11094 other downstream 569074 28406182 ~ 28446591 (-) True G7515
TU11081 other downstream 623612 28391039 ~ 28392053 (-) True G7508
TU11020 other downstream 767142 28244128 ~ 28248523 (-) True G7475
TU10496 other downstream 939221 28074648 ~ 28076444 (-) False LOC122349330
TU11178 other upstream 32587 29049743 ~ 29128775 (-) False G7563
TU11179 other upstream 32587 29049743 ~ 29128775 (-) True G7563
TU11196 other upstream 89158 29106314 ~ 29112734 (-) True LOC122325037
TU11164 other upstream 109615 29126771 ~ 29128775 (-) False G7563
TU11174 other upstream 109615 29126771 ~ 29128775 (-) False G7563

Expression Profile