RNA id: TU11358



Basic Information


Item Value
RNA id TU11358
length 324
lncRNA type sense_over
GC content 0.46
exon number 2
gene id LOC122354733
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29411107 ~ 29434213 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGATCCTGCCTGTCTTACCAAAACTACGAGCAGCGCTGACTGGCTGGAGAAGAACTTTGGCAACTTCTCCGTCTACGCGAGCTTGGAGGATTTGAAGACGCTGAATGCAAATTTCTCCAGCTTTGATTCGTTGGGGCTGCTGAGCCCTAGCCAAGTAGCTGAACTGATCCTGAGCTCCGGAGCACTGAACAACACCAATCAGATTAACGCTGTGTTCGACCACCTGGAGGAAGGCGAAGCTTTCAAGAACGTGGAGGAGTTTCTAACGGAGCTGAACGCATCTCCTGAGGCAAGTCAATGATTCAAAGTTTCTGACAGAGGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11316 lncRNA downstream 77872 29347222 ~ 29347629 (-) True G7637
TU11303 lncRNA downstream 107275 29317581 ~ 29318226 (-) True G7629
TU11194 lncRNA downstream 122612 29301807 ~ 29302889 (-) False G7569
TU11294 lncRNA downstream 132091 29292626 ~ 29293410 (-) True G7624
TU11289 lncRNA downstream 134158 29290761 ~ 29291343 (-) True G7620
TU11388 lncRNA upstream 140 29433286 ~ 29462368 (-) False G7648
TU11385 lncRNA upstream 12805 29445951 ~ 29453588 (-) False G7648
TU11363 lncRNA upstream 14687 29447833 ~ 29473687 (-) False G7648
TU11384 lncRNA upstream 14687 29447833 ~ 29470093 (-) False G7648
TU11387 lncRNA upstream 14687 29447833 ~ 29470093 (-) False G7648
XM_043252743.1 mRNA downstream 23123 29366477 ~ 29402378 (-) True mslnb
XM_043252815.1 mRNA downstream 28924 29366477 ~ 29396577 (-) False mslnb
XM_043259965.1 mRNA downstream 84930 29335596 ~ 29340571 (-) True LOC122359579
XM_043259600.1 mRNA downstream 98963 29320391 ~ 29326538 (-) True LOC122359260
XM_043257448.1 mRNA downstream 136009 29284247 ~ 29289492 (-) True LOC122357818
XM_043245627.1 mRNA upstream 37198 29470344 ~ 29472287 (-) True LOC122349539
XM_043245639.1 mRNA upstream 39154 29472300 ~ 29476081 (-) True LOC122349546
XM_043253878.1 mRNA upstream 69359 29502505 ~ 29518876 (-) True zmp:0000001082
XM_043245650.1 mRNA upstream 86748 29519894 ~ 29523243 (-) True wfikkn1
XM_043260095.1 mRNA upstream 156817 29589963 ~ 29594827 (-) False ears2
TU11193 other downstream 114903 29301807 ~ 29310598 (-) True G7569
TU11179 other downstream 296726 29049743 ~ 29128775 (-) True G7563
TU11364 other upstream 12805 29445951 ~ 29461849 (-) False G7648
TU11407 other upstream 19613 29452759 ~ 29475388 (-) True G7655
TU11359 other upstream 24369 29457515 ~ 29473561 (-) True G7648
TU11367 other upstream 24369 29457515 ~ 29473561 (-) False G7648
TU11370 other upstream 31107 29464253 ~ 29471799 (-) False G7648