RNA id: TU11395


Basic Information

Item Value
RNA id TU11395
length 469
RNA type TUCP
GC content 0.47
exon number 4
gene id LOC122354733
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29411107 ~ 29434213 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgCAGAGGCGAGGCTGTGTGGTAGCGTCAGCGGGGGCCCACTCGGGAGCCTGCCTCCTCCATCGAGTCAGCTGTGCGACTTTGCCATCTCTGAATATGCCTGCTCTTCGGTCGCATCTTCTCTGTCCCCTGACGCCCTCGTCACGCTGCTGAGTTGCAAGGCACAGAGCAACCCGACCACCAGCGCAGAGGCGTGGAAGCTTTTCTTCCAGAAAGTGGCCGGAGTTCTGGAGGAGGCTATGTCAGCGTACTCCAACAAAAGCCTCAGTGACCCTCAGCCTGACTCCCGTGTTCTCGATGCCATTGGAGAGGTGAAAGTCAACAACTTCAGCCCCACACAACTGACAGATGTCCGCTTCATTGCCGACTGGTTCCAGGGACGGCTGAGGCCATTCTTGCCAGCAGTCTCCAGGGACTTCCTGTCCTGCCTTAGCGGCAAGAACTTCAGTTGCGCAACCTACCAAGTTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11316 lncRNA downstream 78665 29347222 ~ 29347629 (-) True G7637
TU11303 lncRNA downstream 108068 29317581 ~ 29318226 (-) True G7629
TU11194 lncRNA downstream 123405 29301807 ~ 29302889 (-) False G7569
TU11294 lncRNA downstream 132884 29292626 ~ 29293410 (-) True G7624
TU11289 lncRNA downstream 134951 29290761 ~ 29291343 (-) True G7620
TU11385 lncRNA upstream 11738 29445951 ~ 29453588 (-) False G7648
TU11363 lncRNA upstream 13620 29447833 ~ 29473687 (-) False G7648
TU11384 lncRNA upstream 13620 29447833 ~ 29470093 (-) False G7648
TU11387 lncRNA upstream 13620 29447833 ~ 29470093 (-) False G7648
TU11382 lncRNA upstream 15328 29449541 ~ 29453588 (-) False G7648
XM_043252743.1 mRNA downstream 23916 29366477 ~ 29402378 (-) True mslnb
XM_043252815.1 mRNA downstream 29717 29366477 ~ 29396577 (-) False mslnb
XM_043259965.1 mRNA downstream 85723 29335596 ~ 29340571 (-) True LOC122359579
XM_043259600.1 mRNA downstream 99756 29320391 ~ 29326538 (-) True LOC122359260
XM_043257616.1 mRNA downstream 136801 29284247 ~ 29289493 (-) False LOC122357818
XM_043245627.1 mRNA upstream 36131 29470344 ~ 29472287 (-) True LOC122349539
XM_043245639.1 mRNA upstream 38087 29472300 ~ 29476081 (-) True LOC122349546
XM_043253878.1 mRNA upstream 68292 29502505 ~ 29518876 (-) True zmp:0000001082
XM_043245650.1 mRNA upstream 85681 29519894 ~ 29523243 (-) True wfikkn1
XM_043260095.1 mRNA upstream 155750 29589963 ~ 29594827 (-) False ears2
TU11193 other downstream 115696 29301807 ~ 29310598 (-) True G7569
TU11178 other downstream 297519 29049743 ~ 29128775 (-) False G7563
TU11364 other upstream 11738 29445951 ~ 29461849 (-) False G7648
TU11407 other upstream 18546 29452759 ~ 29475388 (-) True G7655
TU11359 other upstream 23302 29457515 ~ 29473561 (-) True G7648
TU11367 other upstream 23302 29457515 ~ 29473561 (-) False G7648
TU11370 other upstream 30040 29464253 ~ 29471799 (-) False G7648

Expression Profile