RNA id: TU11381



Basic Information


Item Value
RNA id TU11381
length 288
lncRNA type sense_over
GC content 0.44
exon number 2
gene id G7648
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29426098 ~ 29476338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCGTGTTCTCGATGCCATTGGAGAGGTGAAAGTCAACAACTTCAGCGCCGCACAACTGACAGATGTCCGCTTCATTGCCGACTGGTTCCAGGGACGGCTGAGGCCATTCTTGCCAGCAGTCTCCAGGGACTTCCTGTCCTGCCTTAGCGGCAAGAACTTCAGTTGCGCAACCTACCAAGTTGTGGTGCAGGCTCTCAGTCATCAAGCGTCCCTCATGGACGTGAGGCAACAACGGCTCGTCTTCAGCGATTTTGTCCATCCCTTCCTCTCGAGAGATGACCTAACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11316 lncRNA downstream 78469 29347222 ~ 29347629 (-) True G7637
TU11303 lncRNA downstream 107872 29317581 ~ 29318226 (-) True G7629
TU11194 lncRNA downstream 123209 29301807 ~ 29302889 (-) False G7569
TU11294 lncRNA downstream 132688 29292626 ~ 29293410 (-) True G7624
TU11289 lncRNA downstream 134755 29290761 ~ 29291343 (-) True G7620
XR_006247477.1 lncRNA upstream 12 29462380 ~ 29463055 (-) True LOC122326391
TU11409 lncRNA upstream 1162 29463530 ~ 29464072 (-) True G7656
XR_006247472.1 lncRNA upstream 3567 29465935 ~ 29466645 (-) True LOC122326350
XR_006247458.1 lncRNA upstream 4577 29466945 ~ 29467695 (-) True LOC122326264
TU11405 lncRNA upstream 4757 29467125 ~ 29471548 (-) False G7655
XM_043252743.1 mRNA downstream 23720 29366477 ~ 29402378 (-) True mslnb
XM_043252815.1 mRNA downstream 29521 29366477 ~ 29396577 (-) False mslnb
XM_043259965.1 mRNA downstream 85527 29335596 ~ 29340571 (-) True LOC122359579
XM_043259600.1 mRNA downstream 99560 29320391 ~ 29326538 (-) True LOC122359260
XM_043257448.1 mRNA downstream 136606 29284247 ~ 29289492 (-) True LOC122357818
XM_043245627.1 mRNA upstream 7976 29470344 ~ 29472287 (-) True LOC122349539
XM_043245639.1 mRNA upstream 9932 29472300 ~ 29476081 (-) True LOC122349546
XM_043253878.1 mRNA upstream 40137 29502505 ~ 29518876 (-) True zmp:0000001082
XM_043245650.1 mRNA upstream 57526 29519894 ~ 29523243 (-) True wfikkn1
XM_043260095.1 mRNA upstream 127595 29589963 ~ 29594827 (-) False ears2
TU11193 other downstream 115500 29301807 ~ 29310598 (-) True G7569
TU11179 other downstream 297323 29049743 ~ 29128775 (-) True G7563
TU11370 other upstream 1885 29464253 ~ 29471799 (-) False G7648
TU11406 other upstream 4757 29467125 ~ 29475388 (-) False G7655
TU11360 other upstream 5926 29468294 ~ 29473561 (-) False G7648
TU11380 other upstream 13106 29475474 ~ 29476338 (-) False G7648
TU11666 other upstream 729833 30192201 ~ 30197848 (-) True G7816

Expression Profile