RNA id: TU11385



Basic Information


Item Value
RNA id TU11385
length 287
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G7648
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29426098 ~ 29476338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGATTGCAAAAAAGACATCGCAAACGATGCTGAGTGGCTTGACATCAACTTGGGTCCGTTCTCCGCGGTGGCCAATTACACAGACCTCAAGGAGCTGAACGTCAGCGGGCTGGCAGCTCTGGAATCCCTGTCACCTGACcagaaagcagagctgctgctgGATCCATCCACCGGTGCTCTTGAAAATGTGACCGTGGTGAAAGAGGTGCTGAGCAGCATTGTAAAATCCCCAGAAGGGCAGCAGCTAGAGAAATTCTTTGAAACGTTCGTGGAGGTCAGCAAGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11358 lncRNA downstream 12805 29425501 ~ 29433146 (-) False LOC122354733
XR_006247528.1 lncRNA downstream 15194 29430416 ~ 29430757 (-) True LOC122326869
TU11355 lncRNA downstream 16401 29425501 ~ 29429550 (-) False LOC122354733
XR_006247510.1 lncRNA downstream 18149 29427286 ~ 29427802 (-) True LOC122326770
XR_006247601.1 lncRNA downstream 18782 29426833 ~ 29427169 (-) True LOC122327126
XR_006247499.1 lncRNA upstream 792 29454380 ~ 29454905 (-) True LOC122326670
XR_006247465.1 lncRNA upstream 1546 29455134 ~ 29455875 (-) True LOC122326309
XR_006247488.1 lncRNA upstream 2404 29455992 ~ 29456539 (-) True LOC122326490
XR_006247477.1 lncRNA upstream 8792 29462380 ~ 29463055 (-) True LOC122326391
TU11409 lncRNA upstream 9942 29463530 ~ 29464072 (-) True G7656
XM_043252980.1 mRNA downstream 19217 29411107 ~ 29426734 (-) True LOC122354733
XM_043252743.1 mRNA downstream 43573 29366477 ~ 29402378 (-) True mslnb
XM_043252815.1 mRNA downstream 49374 29366477 ~ 29396577 (-) False mslnb
XM_043259965.1 mRNA downstream 105380 29335596 ~ 29340571 (-) True LOC122359579
XM_043259600.1 mRNA downstream 119413 29320391 ~ 29326538 (-) True LOC122359260
XM_043245627.1 mRNA upstream 16756 29470344 ~ 29472287 (-) True LOC122349539
XM_043245639.1 mRNA upstream 18712 29472300 ~ 29476081 (-) True LOC122349546
XM_043253878.1 mRNA upstream 48917 29502505 ~ 29518876 (-) True zmp:0000001082
XM_043245650.1 mRNA upstream 66306 29519894 ~ 29523243 (-) True wfikkn1
XM_043260095.1 mRNA upstream 136375 29589963 ~ 29594827 (-) False ears2
TU11395 other downstream 11738 29426294 ~ 29434213 (-) False LOC122354733
TU11193 other downstream 135353 29301807 ~ 29310598 (-) True G7569
TU11179 other downstream 317176 29049743 ~ 29128775 (-) True G7563
TU11359 other upstream 3927 29457515 ~ 29473561 (-) True G7648
TU11367 other upstream 3927 29457515 ~ 29473561 (-) False G7648
TU11370 other upstream 10665 29464253 ~ 29471799 (-) False G7648
TU11406 other upstream 13537 29467125 ~ 29475388 (-) False G7655
TU11360 other upstream 14706 29468294 ~ 29473561 (-) False G7648

Expression Profile