RNA id: TU12055



Basic Information


Item Value
RNA id TU12055
length 368
lncRNA type inter_gene
GC content 0.47
exon number 4
gene id G8074
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31492297 ~ 31495910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGACACCTATAAAGGCTGGCTCTTCAAATGGACTAATTACATCAAGGGATACCAAAGGCGATGGTTGCGTCCTGAGCAACGGCTTGCTTTCTTATTACAGGACCCAGGCGGAGATGGGTCACACATGCCGGGGCACCATAAACCTGGCCACAGCCAACATCGCGGTGGATCACTGCTCTAGAGCTGGCCAAAGCAAAGCTTTCCGCCATGCAGGCCGAGTCGGatgaCTCCGGGGATGACTCCACTCCTCCTGCGGCAGGTCAGGGCGCAGGCTCACGCAACTCAGAGGTGCAGTCCACCCTCAGGACGCTGGGCAGCAAGGTGGAGGATCTGAGCACCTGCAATGACCTCCATCGCCAAACACGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU12069 lncRNA downstream 11953 31479187 ~ 31480344 (-) True G8084
TU12032 lncRNA downstream 13437 31354663 ~ 31478860 (-) True G8063
TU12072 lncRNA downstream 21780 31468295 ~ 31470517 (-) True G8086
TU12040 lncRNA downstream 25264 31465621 ~ 31467033 (-) True G8066
TU12029 lncRNA downstream 124069 31360119 ~ 31368228 (-) True G8062
TU12081 lncRNA upstream 52285 31548195 ~ 31548754 (-) True G8093
TU12088 lncRNA upstream 84020 31579930 ~ 31580156 (-) True G8100
TU12089 lncRNA upstream 84828 31580738 ~ 31589790 (-) True G8101
TU12110 lncRNA upstream 126764 31622674 ~ 31625823 (-) False LOC122349741
TU12116 lncRNA upstream 126764 31622674 ~ 31625823 (-) False LOC122349741
XM_043245858.1 mRNA downstream 99211 31384340 ~ 31393086 (-) True LOC122349710
XM_043245847.1 mRNA downstream 113758 31372496 ~ 31378539 (-) True LOC122349700
XM_043236591.1 mRNA downstream 518136 30972789 ~ 30974161 (-) True cldng
XM_043235895.1 mRNA downstream 550571 30936398 ~ 30941726 (-) True creb1a
XM_043235422.1 mRNA downstream 619189 30866438 ~ 30873108 (-) True cd99
XM_043236111.1 mRNA upstream 66071 31561981 ~ 31572621 (-) True tacr3l
XM_043236147.1 mRNA upstream 95227 31591137 ~ 31595295 (-) True cldnd1b
XM_043237501.1 mRNA upstream 99921 31595831 ~ 31602441 (-) True glb1
XM_043245889.1 mRNA upstream 126963 31622873 ~ 31626684 (-) True LOC122349741
XM_043245898.1 mRNA upstream 130993 31626903 ~ 31630020 (-) True LOC122349752
TU11966 other downstream 534811 30946089 ~ 30957486 (-) False G8009
unassigned_transcript_184 other downstream 629336 30862870 ~ 30862961 (-) True trnar-ucu_5
TU11729 other downstream 861792 30630234 ~ 30630505 (-) True G7868
unassigned_transcript_183 other downstream 1105431 30386795 ~ 30386866 (-) True trnap-ugg_2
unassigned_transcript_182 other downstream 1106856 30385369 ~ 30385441 (-) True trnap-ugg_1
TU12079 other upstream 36159 31532069 ~ 31537416 (-) True G8091
TU12077 other upstream 54276 31550186 ~ 31554035 (-) True G8089
TU12112 other upstream 126764 31622674 ~ 31625823 (-) False LOC122349741
TU12119 other upstream 126764 31622674 ~ 31626415 (-) False LOC122349741
TU12124 other upstream 131060 31626970 ~ 31629972 (-) False LOC122349752

Expression Profile