RNA id: TU12122


Basic Information

Item Value
RNA id TU12122
length 907
lncRNA type sense_over
GC content 0.48
exon number 2
gene id LOC122349752
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31626903 ~ 31630020 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCACAACAGCAGCTCCCTCAACAACCACTACAGCTCATACTGAATCGTCCACCACTACTGCAGGAGTTACCACAACAACACCACCAACTACTGTTACAACAACGGCATCCCCCACAccatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGCATCCCCCACAccatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGTTACAACAACGGCATCCCTCacaacatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGTTACAACAACGGCATCCCCCacaacatctacaacaacagcaGCGCCCACAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGCATCCCCCACATCATCTACAACAACAGCAGCTCCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGTTACAACGACTGCATCCCCCacaacatctacaacaacagcaGCGCCCTCAACAACCACTACAGCTCATACTGAATCATCCACCACTTCTGCAGGAGTTACCACAACAGCACCATCAACTACTTTTACAACAATTGCATCCTCCacaacatctacaacaacagcagcaccaTCAACAACCACTGCAACTGTTATTGATTCATCCACCACTACTGCAGGAGTTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12118 lncRNA downstream 555 31622674 ~ 31626415 (-) False LOC122349741
TU12105 lncRNA downstream 555 31625931 ~ 31626415 (-) False LOC122349741
TU12106 lncRNA downstream 555 31625931 ~ 31626415 (-) False LOC122349741
TU12110 lncRNA downstream 1147 31622674 ~ 31625823 (-) False LOC122349741
TU12116 lncRNA downstream 1147 31622674 ~ 31625823 (-) False LOC122349741
XM_043245889.1 mRNA downstream 286 31622873 ~ 31626684 (-) True LOC122349741
XM_043237501.1 mRNA downstream 24529 31595831 ~ 31602441 (-) True glb1
XM_043236147.1 mRNA downstream 31675 31591137 ~ 31595295 (-) True cldnd1b
XM_043236111.1 mRNA downstream 54349 31561981 ~ 31572621 (-) True tacr3l
XM_043245858.1 mRNA downstream 233884 31384340 ~ 31393086 (-) True LOC122349710
XM_043223784.1 mRNA upstream 6402 31634401 ~ 31661603 (-) True LOC122327810
XM_043233764.1 mRNA upstream 100089 31728088 ~ 31734933 (-) True best2
XM_043233726.1 mRNA upstream 111786 31739785 ~ 31745699 (-) True get3
XM_043233753.1 mRNA upstream 117963 31745962 ~ 31750050 (-) True rnf11a
TU12119 other downstream 555 31622674 ~ 31626415 (-) False LOC122349741
TU12112 other downstream 1147 31622674 ~ 31625823 (-) False LOC122349741
TU12077 other downstream 72935 31550186 ~ 31554035 (-) True G8089
TU12079 other downstream 89554 31532069 ~ 31537416 (-) True G8091
TU11966 other downstream 669484 30946089 ~ 30957486 (-) False G8009

Expression Profile