RNA id: XM_043245898.1


Basic Information

Item Value
RNA id XM_043245898.1
length 1504
RNA type mRNA
GC content 0.46
exon number 4
gene id LOC122349752
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31626903 ~ 31630020 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCACTAAGTGGTATTTAAGAGGCAGCGTCACAGGTGATCAAAGAGAAGTGGAGGAACTGAAGCATAGAATAACTATCGGACCACTGATACAACAGCGGATTACTATTCAACGTGTATAGCCTAATATAGCTGCTCAAGGACTGACTCTTCTTATTACCTCTAGACATCTTCCAGAATGGAGggaaaagtttttattataatgtgcattttcagTGTCCAAAGTATATCCTTGATAATCATATCACTATCACCTGTTAGTACAACTGACACCCCATCAACAACTACAATAACAGAAGTGCCCTCATCAACCCCTACAACTGTCGCTGAATCATCCACCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGTTACAACAACTGCACCCCCCACAACATCTATAACAACAGCAGCACCCTCAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGTTACAACAACGGCATCCCCCACAccatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGTTACAACCACGGCATCCCCCacaacatctacaacaacagcaGCGCCCACAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGCATCCCCCACAccatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGTTACAACAACGGCATCCCTCacaacatctacaacaacagcagcacCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGTTACCACAACAGCACCATCAACTACTGTTACAACAACGGCATCCCCCacaacatctacaacaacagcaGCGCCCACAACAACCACTACAGCTCATACTGAATCATCCACCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGCATCCCCCACATCATCTACAACAACAGCAGCTCCCTCAACAACCACTACAGCTCATACTGAATCATCCAGCACTACTGCAGGAGATACCACAACAGCACCATCAACTACTGTTACAACGACTGCATCCCCCacaacatctacaacaacagcaGCGCCCTCAACAACCACTACAGCTCATACTGAATCATCCACCACTTCTGCAGGAGTTACCACAACAGCACCATCAACTACTTTTACAACAATTGCATCCTCCacaacatctacaacaacagcagcaccaTCAACAACCACTGCAACTGTTATTGATTCATCCACCACTACTGCAGGAGTTACAACACACCATCAACATCACCATCATCTACAACAACAGTGTTTCAACAACCACTACAGCTCATACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12118 lncRNA downstream 488 31622674 ~ 31626415 (-) False LOC122349741
TU12105 lncRNA downstream 488 31625931 ~ 31626415 (-) False LOC122349741
TU12106 lncRNA downstream 488 31625931 ~ 31626415 (-) False LOC122349741
TU12110 lncRNA downstream 1080 31622674 ~ 31625823 (-) False LOC122349741
TU12116 lncRNA downstream 1080 31622674 ~ 31625823 (-) False LOC122349741
XM_043245889.1 mRNA downstream 219 31622873 ~ 31626684 (-) True LOC122349741
XM_043237501.1 mRNA downstream 24462 31595831 ~ 31602441 (-) True glb1
XM_043236147.1 mRNA downstream 31608 31591137 ~ 31595295 (-) True cldnd1b
XM_043236111.1 mRNA downstream 54282 31561981 ~ 31572621 (-) True tacr3l
XM_043245858.1 mRNA downstream 233817 31384340 ~ 31393086 (-) True LOC122349710
XM_043223784.1 mRNA upstream 4381 31634401 ~ 31661603 (-) True LOC122327810
XM_043233764.1 mRNA upstream 98068 31728088 ~ 31734933 (-) True best2
XM_043233726.1 mRNA upstream 109765 31739785 ~ 31745699 (-) True get3
XM_043233753.1 mRNA upstream 115942 31745962 ~ 31750050 (-) True rnf11a
TU12119 other downstream 488 31622674 ~ 31626415 (-) False LOC122349741
TU12112 other downstream 1080 31622674 ~ 31625823 (-) False LOC122349741
TU12077 other downstream 72868 31550186 ~ 31554035 (-) True G8089
TU12079 other downstream 89487 31532069 ~ 31537416 (-) True G8091
TU11966 other downstream 669417 30946089 ~ 30957486 (-) False G8009

Expression Profile