RNA id: TU2794


Basic Information

Item Value
RNA id TU2794
length 505
lncRNA type sense_over
GC content 0.45
exon number 2
gene id mgarpb
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8492144 ~ 8500212 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGGCAGATGACCATGTCAAGTCCGAGGCAGACATCCCCGCTAGAAGCCTCGCTTCGTCAGAAGAGGCCCTCGTTACAGATGTGGAGAACATTTTGGAATCGCAAGAAGACTCGACAGAAGAAGACTCTGTCTCTGGAGCTGCAGGGGTGACATCAGAAACAGTGGAGGAAGCGGGTCAGGAAGTGGAAGAATGTAAAGGTTTGTGTCATGAGTCAACGGAAACGGAGCATGTAGATCTCACAGCACCAACAGCAGATCCGGAGGAATTATTACAGGCTACGGGTGCAACAGAAGCTGCAGAAGAAGTAATTGTCACGGAAATGACGCAGGATGCTGTGGAGAATGCTAAACCTGTTGAGGCATCAGATGAAGCTGTTGAAAGTGGAAATGTTGCAATGAGAATGACACAAGCCTGAAGTGAATGTACCACACCTGAGATACCGAGACACTGAAAACCAGTCAAATGAACACAATCTGTGATGTTATACATACACTAAAGTTAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251726.1 lncRNA downstream 43779 8446548 ~ 8448624 (-) True LOC122351284
TU2701 lncRNA downstream 325016 8138483 ~ 8167387 (-) True G1868
XR_006250489.1 lncRNA downstream 415016 8076701 ~ 8077387 (-) True LOC122341751
TU2691 lncRNA downstream 415073 8075175 ~ 8077330 (-) False LOC122341751
TU2672 lncRNA downstream 508100 7953213 ~ 7984303 (-) False G1845
TU2796 lncRNA upstream 4322 8497602 ~ 8500177 (-) False mgarpb
TU2801 lncRNA upstream 62760 8556040 ~ 8607795 (-) False G1926
TU2919 lncRNA upstream 138184 8631464 ~ 8634397 (-) True G2010
TU2929 lncRNA upstream 176133 8669413 ~ 8670804 (-) True G2016
TU2947 lncRNA upstream 202592 8695872 ~ 8697401 (-) True G2033
XM_043239735.1 mRNA downstream 2348 8472819 ~ 8490055 (-) False elf2b
XM_043239707.1 mRNA downstream 2348 8472819 ~ 8490055 (-) False elf2b
XM_043239726.1 mRNA downstream 4104 8472819 ~ 8488299 (-) False elf2b
XM_043239716.1 mRNA downstream 6837 8472819 ~ 8485566 (-) False elf2b
XM_043239752.1 mRNA downstream 13179 8472819 ~ 8479224 (-) False elf2b
XM_043250010.1 mRNA upstream 72873 8566153 ~ 8598509 (-) False camk2d2
XM_043250040.1 mRNA upstream 72873 8566153 ~ 8598474 (-) False camk2d2
XM_043250024.1 mRNA upstream 72873 8566153 ~ 8598474 (-) True camk2d2
XM_043250032.1 mRNA upstream 72873 8566153 ~ 8598474 (-) False camk2d2
XM_043250073.1 mRNA upstream 72873 8566153 ~ 8598473 (-) False camk2d2
XR_006250550.1 other downstream 1196724 7218986 ~ 7295679 (-) False dmd
XR_006250549.1 other downstream 1196770 7205584 ~ 7295633 (-) False dmd
TU2401 other downstream 1322982 7162323 ~ 7169421 (-) False G1642
XR_006250919.1 other downstream 1364996 7071589 ~ 7127407 (-) False trpc5a
TU2105 other downstream 1951020 6539528 ~ 6541383 (-) False LOC122342514
TU2800 other upstream 110020 8603300 ~ 8607795 (-) True G1926
TU2970 other upstream 285938 8779218 ~ 8782587 (-) False LOC122351550
TU2978 other upstream 301791 8795071 ~ 8798355 (-) False LOC122351550
TU3335 other upstream 1905907 10399187 ~ 10401686 (-) True G2302
TU3397 other upstream 2248642 10741922 ~ 10745896 (-) False LOC122347930