Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3428 |
| length | 713 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | G2350 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 10827685 ~ 10837245 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3429 | lncRNA | upstream | 5501 | 10827685 ~ 10829530 (+) | False | G2350 |
| TU3247 | lncRNA | upstream | 461184 | 10372962 ~ 10373847 (+) | True | G2246 |
| TU3213 | lncRNA | upstream | 755561 | 10078885 ~ 10079470 (+) | True | G2219 |
| TU3114 | lncRNA | upstream | 1047870 | 9784218 ~ 9787161 (+) | True | G2149 |
| XR_006252042.1 | lncRNA | upstream | 1772422 | 9061961 ~ 9062609 (+) | True | LOC122353659 |
| TU3431 | lncRNA | downstream | 380 | 10837625 ~ 10838465 (+) | True | G2352 |
| TU3433 | lncRNA | downstream | 110874 | 10948119 ~ 10982967 (+) | True | G2354 |
| TU3434 | lncRNA | downstream | 110874 | 10948119 ~ 10982967 (+) | False | G2354 |
| TU3526 | lncRNA | downstream | 363887 | 11201132 ~ 11201666 (+) | True | G2420 |
| TU3538 | lncRNA | downstream | 473348 | 11310593 ~ 11315354 (+) | True | G2430 |
| XM_043243188.1 | mRNA | upstream | 100177 | 10723316 ~ 10734854 (+) | True | LOC122347952 |
| XM_043243161.1 | mRNA | upstream | 152071 | 10679587 ~ 10682960 (+) | True | LOC122347900 |
| XM_043243052.1 | mRNA | upstream | 335557 | 10490262 ~ 10499474 (+) | True | LOC122347771 |
| XM_043243051.1 | mRNA | upstream | 335557 | 10491518 ~ 10499474 (+) | False | LOC122347771 |
| XM_043243041.1 | mRNA | upstream | 344947 | 10483641 ~ 10490084 (+) | True | tlr3 |
| XM_043243148.1 | mRNA | downstream | 3183 | 10840428 ~ 10844345 (+) | True | LOC122347879 |
| XM_043243113.1 | mRNA | downstream | 7711 | 10844956 ~ 10866041 (+) | True | LOC122347856 |
| XM_043243050.1 | mRNA | downstream | 225367 | 11062612 ~ 11076698 (+) | True | LOC122347755 |
| XM_043236779.1 | mRNA | downstream | 266892 | 11104137 ~ 11121875 (+) | True | LOC122342727 |
| XM_043236800.1 | mRNA | downstream | 285835 | 11123080 ~ 11143007 (+) | True | LOC122342742 |
| XR_006251248.1 | other | upstream | 345920 | 10483640 ~ 10489111 (+) | False | tlr3 |
| TU3254 | other | upstream | 436991 | 10397373 ~ 10398040 (+) | True | G2253 |
| XR_006251240.1 | other | upstream | 501359 | 10256662 ~ 10333672 (+) | False | fat1a |
| TU3404 | other | downstream | 7767 | 10845012 ~ 10981356 (+) | False | LOC122347856 |
| TU3408 | other | downstream | 7767 | 10845012 ~ 10981356 (+) | False | LOC122347856 |
| TU3407 | other | downstream | 77931 | 10915176 ~ 10981356 (+) | False | LOC122347856 |
| unassigned_transcript_4 | other | downstream | 473148 | 11310393 ~ 11310464 (+) | True | trnap-agg |
| TU3862 | other | downstream | 1000386 | 11837631 ~ 11840166 (+) | False | LOC122350793 |
