RNA id: XM_043240943.1


Basic Information

Item Value
RNA id XM_043240943.1
length 4861
RNA type mRNA
GC content 0.42
exon number 6
gene id ugt8
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12097910 ~ 12117383 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAACAACGCACCTGACGCTTCCCAGGGGATTTGAGGGAAGGCCGTAGTCTGTCTATTGTTCTTGCGTTTACACTGCTATGGCTGGACCACTCCCTGCCTGTGAATTGAGGTTTCGCATATCCCGCCCTCCCTGGAGTTCTGATACACAACGCCCCATCGCTTAGCCATTGGGAAAACCACCTCGCCTGTTGTGGCAAACGGGCAGTTTTAACCGGCCAACACCATTTGTGGATTTATGTAAAAGCGTCAGAAGCTTAGGAGAGCGAGGGGACGTGAATTTCGCAGACTTTCGGGCACCGATCTACCGGGTTCACCTGTACAGTCATGAAGGCTTTTTTCCTGCTTGCCACTTTGCTGTGGTGTTTAGCATTGAGTTTCTCATGGGCAGCTAAGATTGTGGTAGTTCCTCCAATTATGTTTGAGAGCCACCTGTACATCTTTAAGACCCTGGCCTCTGCTCTTCACGCCGAGGGCCACGACACAGTCTTCCTTGTCTCCGAAGGTCGCGAGGTCCCTGCTTCCAACCATTATCGTCTCCAACGCTACCCTGGAATCTTTAACAGCACCTCAGCCGATGATTTCCTCCAATCAAAGGTTCGCAACATCTTCTCAGGGCGTCTCACAGCGCTGGAGCTTTTTGACATCCTGGACCATTATTCTCAAAACTGCGATGCTGTTGTTGGGAGTGCTTCTGTCATGGAGCAGCTAAAACGTGAACAGTTTGACCTCCTGCTCGTTGATCCCAATGAAATGTGTGGATTTGTCATAGCTCACATTCTGGGTGTCCAGTACGCAGTATTCAGCACAGGACTGTGGTACCCTGCGGAAGTTGGGGCGCCAGCACCACTGTCTTACGTCCCAGAATTTAACTCTCTACTAACGGACCGTATGTCATTGTTCCAACGGGTAGCTAACACAGCAGTGTACCTGGTTTCCAGATTTGGTGTCCAGTTCCTGGTTCTACCCAAATATGATCGCATCATGAGGAAATACAACATCCAGCCATCCGTGTCTATGCATGATCTCGTTCAGAACAGTCGACTTTGGATGCTGTGTACTGACATGGCGCTTGAGTTCCCACGACCCACTCTGCCGCATGTTGTCTATGTAGGTGGCATCCTCACCAAACCCCCCAGCCCCTTGCCACAGGAGTTTGAAGCCTGGGTGAAGGATACAGATGAACATGGTTTCGTAGTGGTGTCATTTGGTGCAGGAGTGAAGTACCTTTCAGAAGACATTGCTCAGAAACTCGCAGGAGCCCTGAGCCGTCTTCCCCAGAGAGTCATCTGGAGGTTCTCTGGAGTTCCTCCCTCCAATCTGGGCAATAATACTAAACTAGTGGACTGGATGCCACAGAACGACTTGTTGGgccacacaaacacacgggCCTTCTTGAGCCACGGGGGCTTGAACAGCATCTATGAGGCCATGTATCATGGCGTCCCCGTGGTGGGTGTACCGCTGTTTGGAGATCACTATGACACTATGACGCGAGTTCAGGCCAAAGGCATGGGCATAATGCTTGAGTGGAAAAGAATGAGCGAAGAAGATCTTTATACTGCCATGGTTAATGTCATAACAGACAAAAGGTATCGCGAGCGAGCACAATTGCTGTCTCAGATTCATAAAGATCAACCTGGTCATCCAGTGAGTCGGGCGGTTTATTGGATAAGCTATATACTCCGTCACCGCGGCGCCCAACACCTCCGCTCGGCAGTCTACGAGATCCCCACCTACCAGTACTTCTTATTAGACGTCGCTGTGGTGATAGGAGTGTGCCTGCTTCTACTTGGCTACTTGCTGTACCGAATAGGCAAGTGCATCCAATCACGATTGGGGCGCAGTTCATCTCCAGCAGAGAAGGTGAACGGACACTGTCATAATGGAATTCCTAATGgcaagcacaaaagaaatggcCACGTTAAAAGTATGGAGAAGAAACTAAAGTAAAGCACTACGAGAAATCAACACTAACGCTTCACTAAAGAGAGGAATTAACTACTCTTCACTCAAAGCAGGGCCTATCCAGGAAATAAATACATGGgtcaataaagaaacaaaccaaCCATTATAACAATGAACTGTAAGTGGGAAGCCAAAGTAAGGAAGAATGGAAGGGATCCAAAAAAAGCATAAACGGAAAGCTCCTGAGGACGTTGTTTTCCCTGTTGAATGGATTTAACGTTCAGTTGTGGTCCTGAATGTTGAGTTTATCCTTGTGGAAAAAGCAACGGTttagaaatgtatgtttttaacaAGAAACTGTCATGCTATGGGGCATCAGGTTTTACTGCATCCAAACACAACAGAGATCTGtaactatttatataaatttcatacattttgtgCACACGGCACTGTTGACCGCTGTGCGctgaatttaatttatgttctatatttatgtttatgcacACTCCATCCctactttgttttcatttcttcagGAATAATAACTCTCAGAAATTAGCAAGCTAGCACATCTGCTAGTGTTCATGTTGCCAGCCTATCCTTAATatttaacatgcttttagtTTTTGCTAACATTACAAACAGCCCTAGCTAATGCTGCTAGTTATGCTAGCTATACAAAATGCTAGAGATTTAGGAAAGTTAAACTTCTATTTACAATAATTCTGGAATGCTAGGAGACAGTGTACTGGTAAACTAACAGTCTTAGAGCATCCTAGccacttttctctttttgttttgttgttcttggctagtttaatttaatgaattaaaagcaaaaccGTAGTTTCTCTTCAGATAAGGCGAAACATCCCGTCACGCGATCCTTGTGTTGGCAGATACGGGTTCAAATGAGCAAAAGGAGACAATTTATTAAGCCATTTACCCGTACTATTGTGTTGCTTCATGGATGTTTAGGATTTGCAGTTAAAATTTCTTGCTTAGCCTACTGCAGTCATCTTTACCGAAAggtttattttatgaaacaaatcGTGCTTAGGAGgaactttttttaaaggggGGAGGGGGTATACAGTAGTTTTAATGTGTGAGTGCCTGTGTGTCTCAAAATGTCCCaaacaaactacatttttattagaatgtGCATCAGACGAGTGATGTTATCAAAGCGAAAGATTGTTTGCTGACATGTTCCCACCAATCAGTAGGCCTAGAGTGACCTGGAGGAATTCGGTACTGTAATGAATATTTTCCCATGGTGCTCTATTGGTTCTTTTAACCTTCAGCCATTTTCATTACCGTGTTTTGGTAACATGTCAATCTAACATTTAGTTGTGTAACTTTTCAGGTATTTTGAGGTGGCGATAAACTTCTGTAAATTATTTGTGCGTTAAAGTGCATTCTCAGCCTcagaggttttattttatttaaaaaaaatgccactGGACAACCTGTTATGAAATCACATGCTGGTTTTACAACTCAATGTCAGACTGAACTGTTGCCATTAATACTTTCCGTGTGATTGTTTTAATGTACCACAACACTGTTCATATAAACATCATATTTCCCAGATCACTAAACGGTCAAATCACCTTAAGAACACTAGGAATCAAAACCAAAATCtcttaaaaaaacactcacTAAGGTTATAACGATTTGAAGCTGTTTAAACCACGaggtttaaagcatttcttcaGCCAAGCACTGTTTTAGACTGTCCATACTTGAAAATACACTGGCTGCAATATGGCTGTAAATGCATCAGAACTATGACTGGTTAAACAGTGGTTaaacgcacactcacacacttcgAACGTTGTAATTGTTTTctagttgtttgttttgtatgatTTTCAGTATTAATATTAGATGGATAACAACAGAGGAAAAAGCTGCAGATGGGCTCCTACCTTaaaggctgtgtgtgtgcgtgtgtgtgtgtgtgtgagttcttATAGATTGTGATTTCTTATATGTGAGGTGTGTATGCGTGTACATTTGAATGGGTTTGCTCGAGCCTACTTGTGTCCAGCTTTGGCTTTATATACTGATCATTTAAAACCAATGCTCCAGTTCACTTACAGTACATCGATGCCTTTCTTTGTCTCTCGTAGTCTGTTTCCTGATCAAGTCCTTGTAGAAGTAGTTGTTAAAGGCTGCTTGAAGGAGtttagtgtaattttttttaggtttttttttttttttttttttcataatgatttaatgtgtgtctgtgttatgtaaataaaagacaaacaaaaatactaatggtaaataaacattaaatattttgtttgcttaCTCCTGTGGTCTGATGATTCTCTTTCAAAAGAGGCTGCCAACTGTGACACAAAAGGAAGGTCAGTAAGCTAGTCTGAAAGTTACAGCGCACATGTGTGCCGTCTCACTTCTGTTCTCCTGTTACACTGTCCCGAAGTGGTTTGTTTCGGTTTTTCCCATGACCTCATTGATAACCCTTATTCTGCAAAATTGCATGTGCATTTTGTGCTATCGGGTTAAATGGGGTTTGCTATTGTTATCCTGTGAAAATAGCGAAGCGCTTTGAACACAATTAACAattggcaataaaaaaaaacagcgggGAACTTTTTCGATTTCTTAGATAATAAATGCCTGCGGGGGGAGATGAGGGAGTGTAAAACTACACGCCGGTTTGTTCGGCAGGTATCAGGTGTTGTCCTTATGTTTTCAACGCTGTCACATTAGATGGGTGTGTATCctgaagatgtgtgtgtgtgttgattaaGAGATAAACTGACACTTTACCCCATCTTTCTCTTAATTATTCACTGGCAGTTTAtcatgtgatgtgtgtgtattagtatgCATGTCTGTGTATGAAGACTGTTCAGTGCTAATTAAGACTGTTATTCTTGTTTCACCTTAAGACAAcccaggctcattggaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K04628 CGT, UGT8; ceramide galactosyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3979 lncRNA downstream 168933 11927551 ~ 11928996 (-) True G2742
TU3914 lncRNA downstream 187919 11849622 ~ 11910010 (-) False G2690
TU3915 lncRNA downstream 187919 11855220 ~ 11910010 (-) True G2690
XR_006247878.1 lncRNA downstream 301945 11793914 ~ 11795984 (-) False LOC122328967
TU3987 lncRNA upstream 25523 12142906 ~ 12150716 (-) True G2750
TU4090 lncRNA upstream 172446 12289829 ~ 12290106 (-) True G2826
TU4096 lncRNA upstream 217969 12335352 ~ 12336759 (-) True G2829
TU4112 lncRNA upstream 308830 12426213 ~ 12442443 (-) True G2837
TU4113 lncRNA upstream 309784 12427167 ~ 12443813 (-) False LOC122348535
XM_043250940.1 mRNA downstream 3035 11960370 ~ 12094894 (-) True ndst3
XM_043236389.1 mRNA downstream 171107 11923120 ~ 11926822 (-) True mettl14
XM_043247864.1 mRNA downstream 179722 11910750 ~ 11918207 (-) True LOC122351032
XM_043249937.1 mRNA downstream 247274 11847007 ~ 11850655 (-) True grhprb
XM_043236331.1 mRNA downstream 279057 11816476 ~ 11818872 (-) True tma16
XM_043249903.1 mRNA upstream 44454 12161837 ~ 12195683 (-) True tll1
XM_043236922.1 mRNA upstream 94053 12211436 ~ 12225082 (-) True cpe
XM_043246632.1 mRNA upstream 118822 12236205 ~ 12246905 (-) True klhl2
XM_043236093.1 mRNA upstream 131112 12248495 ~ 12281828 (-) False rapgef2a
XM_043236102.1 mRNA upstream 131112 12248495 ~ 12281827 (-) False rapgef2a
TU3761 other downstream 585096 11510439 ~ 11512833 (-) True G2584
unassigned_transcript_5 other downstream 599571 11498285 ~ 11498358 (-) True trnai-aau
TU3498 other downstream 1043988 11053154 ~ 11053941 (-) True G2401
TU3478 other downstream 1116563 10953875 ~ 10981366 (-) True G2382
XR_006251247.1 other downstream 1283854 10810310 ~ 10814075 (-) False LOC122347618
XR_006250806.1 other upstream 224352 12341735 ~ 12365995 (-) False gria2a
XR_006250810.1 other upstream 226066 12343449 ~ 12365995 (-) False gria2a
XR_006251305.1 other upstream 786816 12904199 ~ 12926482 (-) False prom1b
XR_006251304.1 other upstream 786816 12904199 ~ 12926482 (-) True prom1b
TU4379 other upstream 1037103 13154486 ~ 13159246 (-) False smim14

Expression Profile