Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4359 |
| length | 1495 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | smim18 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 12969093 ~ 12973012 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0015833 | peptide transport | biological_process |
| GO:0045184 | establishment of protein localization | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0071702 | organic substance transport | biological_process |
| GO:0071705 | nitrogen compound transport | biological_process |
| GO:0042886 | amide transport | biological_process |
| GO:0033036 | macromolecule localization | biological_process |
| GO:0008104 | protein localization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4338 | lncRNA | downstream | 81440 | 12886776 ~ 12887653 (-) | True | G3020 |
| TU4173 | lncRNA | downstream | 351051 | 12617768 ~ 12618042 (-) | True | G2891 |
| TU4170 | lncRNA | downstream | 373799 | 12592441 ~ 12595294 (-) | True | G2889 |
| TU4163 | lncRNA | downstream | 418854 | 12549922 ~ 12550239 (-) | True | G2882 |
| TU4117 | lncRNA | downstream | 513521 | 12455354 ~ 12455572 (-) | True | G2842 |
| TU4410 | lncRNA | upstream | 232775 | 13205787 ~ 13206826 (-) | True | G3070 |
| TU4414 | lncRNA | upstream | 321685 | 13294697 ~ 13295015 (-) | True | G3074 |
| TU4420 | lncRNA | upstream | 329741 | 13302753 ~ 13313529 (-) | True | G3080 |
| TU4437 | lncRNA | upstream | 417063 | 13390075 ~ 13390345 (-) | True | G3093 |
| TU4438 | lncRNA | upstream | 418053 | 13391065 ~ 13391301 (-) | True | G3094 |
| XM_043243959.1 | mRNA | downstream | 2586 | 12963598 ~ 12966507 (-) | True | qdprb.1 |
| XM_043243898.1 | mRNA | downstream | 12831 | 12944712 ~ 12956262 (-) | False | ldb2b |
| XM_043243887.1 | mRNA | downstream | 12831 | 12944717 ~ 12956262 (-) | False | ldb2b |
| XM_043243880.1 | mRNA | downstream | 12832 | 12944109 ~ 12956261 (-) | True | ldb2b |
| XM_043243687.1 | mRNA | downstream | 25676 | 12929116 ~ 12943417 (-) | True | tapt1b |
| XM_043243510.1 | mRNA | upstream | 20232 | 12993244 ~ 13084503 (-) | False | adgrl3.1 |
| XM_043243486.1 | mRNA | upstream | 20232 | 12993244 ~ 13084503 (-) | False | adgrl3.1 |
| XM_043243505.1 | mRNA | upstream | 20232 | 12993244 ~ 13084503 (-) | False | adgrl3.1 |
| XM_043243497.1 | mRNA | upstream | 20232 | 12993244 ~ 13084503 (-) | False | adgrl3.1 |
| XM_043243491.1 | mRNA | upstream | 20232 | 12993244 ~ 13084503 (-) | False | adgrl3.1 |
| XR_006251305.1 | other | downstream | 42611 | 12904199 ~ 12926482 (-) | False | prom1b |
| XR_006251304.1 | other | downstream | 42611 | 12904199 ~ 12926482 (-) | True | prom1b |
| XR_006250806.1 | other | downstream | 603098 | 12341735 ~ 12365995 (-) | False | gria2a |
| XR_006250810.1 | other | downstream | 603098 | 12343449 ~ 12365995 (-) | False | gria2a |
| TU3761 | other | downstream | 1456260 | 11510439 ~ 11512833 (-) | True | G2584 |
| TU4379 | other | upstream | 181474 | 13154486 ~ 13159246 (-) | False | smim14 |
| unassigned_transcript_6 | other | upstream | 245382 | 13218394 ~ 13218468 (-) | True | trnar-ucg |
| unassigned_transcript_7 | other | upstream | 246284 | 13219296 ~ 13219368 (-) | True | trnar-ucg_1 |
| unassigned_transcript_8 | other | upstream | 247788 | 13220800 ~ 13220873 (-) | True | trnae-cuc |
| unassigned_transcript_9 | other | upstream | 248570 | 13221582 ~ 13221654 (-) | True | trnar-ucu |
