Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU6197 |
| length | 1248 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 3 |
| gene id | G4345 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 18706209 ~ 18708429 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0016064 | immunoglobulin mediated immune response | biological_process |
| GO:0002250 | adaptive immune response | biological_process |
| GO:0002263 | cell activation involved in immune response | biological_process |
| GO:0042113 | B cell activation | biological_process |
| GO:0016444 | somatic cell DNA recombination | biological_process |
| GO:0002285 | lymphocyte activation involved in immune response | biological_process |
| GO:0016445 | somatic diversification of immunoglobulins | biological_process |
| GO:0016447 | somatic recombination of immunoglobulin gene segments | biological_process |
| GO:0002562 | somatic diversification of immune receptors via germline recombination within a single locus | biological_process |
| GO:0002312 | B cell activation involved in immune response | biological_process |
| GO:0045190 | isotype switching | biological_process |
| GO:0002366 | leukocyte activation involved in immune response | biological_process |
| GO:0002377 | immunoglobulin production | biological_process |
| GO:0002381 | immunoglobulin production involved in immunoglobulin-mediated immune response | biological_process |
| GO:0002440 | production of molecular mediator of immune response | biological_process |
| GO:0002460 | adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | biological_process |
| GO:0002200 | somatic diversification of immune receptors | biological_process |
| GO:0002204 | somatic recombination of immunoglobulin genes involved in immune response | biological_process |
| GO:0019724 | B cell mediated immunity | biological_process |
| GO:0002208 | somatic diversification of immunoglobulins involved in immune response | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6214 | lncRNA | upstream | 11636 | 18694183 ~ 18694573 (+) | False | LOC122340556 |
| TU6182 | lncRNA | upstream | 106550 | 18598356 ~ 18599659 (+) | True | G4331 |
| TU6140 | lncRNA | upstream | 394868 | 18309934 ~ 18311341 (+) | True | G4296 |
| TU5942 | lncRNA | upstream | 491125 | 18213305 ~ 18215084 (+) | True | G4166 |
| TU5832 | lncRNA | upstream | 807665 | 17896588 ~ 17898544 (+) | False | lsm6 |
| TU6217 | lncRNA | downstream | 6518 | 18714947 ~ 18715231 (+) | True | G4356 |
| TU6219 | lncRNA | downstream | 8445 | 18716874 ~ 18717095 (+) | False | LOC122340556 |
| TU6221 | lncRNA | downstream | 14646 | 18723075 ~ 18723295 (+) | True | G4360 |
| TU6222 | lncRNA | downstream | 38805 | 18747234 ~ 18747753 (+) | True | G4361 |
| XR_006248576.1 | lncRNA | downstream | 285332 | 18993761 ~ 19176827 (+) | True | LOC122333031 |
| XM_043233897.1 | mRNA | upstream | 12821 | 18687317 ~ 18693388 (+) | True | cep44 |
| XM_043233886.1 | mRNA | upstream | 12821 | 18687782 ~ 18693388 (+) | False | cep44 |
| XM_043233907.1 | mRNA | upstream | 12821 | 18687817 ~ 18693388 (+) | False | cep44 |
| XM_043233850.1 | mRNA | upstream | 108572 | 18584156 ~ 18597637 (+) | True | galnt7 |
| XM_043233820.1 | mRNA | downstream | 131521 | 18839950 ~ 18858945 (+) | False | wdr17 |
| XM_043233828.1 | mRNA | downstream | 131561 | 18839990 ~ 18858945 (+) | True | wdr17 |
| XM_043233802.1 | mRNA | downstream | 135761 | 18844190 ~ 18858945 (+) | False | wdr17 |
| XM_043233805.1 | mRNA | downstream | 135762 | 18844191 ~ 18858945 (+) | False | wdr17 |
| XM_043234072.1 | mRNA | downstream | 160253 | 18868682 ~ 18872848 (+) | True | spcs3 |
| unassigned_transcript_101 | other | upstream | 127378 | 18578750 ~ 18578831 (+) | True | trnas-aga |
| XR_006251260.1 | other | upstream | 423448 | 18247250 ~ 18282761 (+) | False | dclk2a |
| XR_006251261.1 | other | upstream | 423448 | 18247252 ~ 18282761 (+) | False | dclk2a |
| XR_006251846.1 | other | upstream | 1097368 | 17573121 ~ 17608841 (+) | False | gab1 |
| TU5228 | other | upstream | 3052828 | 15653093 ~ 15653381 (+) | True | G3647 |
| TU6436 | other | downstream | 812655 | 19521084 ~ 19522399 (+) | True | G4528 |
| unassigned_transcript_103 | other | downstream | 1404013 | 20112442 ~ 20112514 (+) | True | trnak-cuu |
| TU7127 | other | downstream | 2613036 | 21321465 ~ 21361275 (+) | False | LOC122348864 |
| TU7152 | other | downstream | 2882448 | 21590877 ~ 21620580 (+) | False | rnf24 |
| TU7172 | other | downstream | 2923786 | 21632215 ~ 21635052 (+) | True | G5037 |
