Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU6439 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G4531 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 19524546 ~ 19524780 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006248576.1 | lncRNA | upstream | 347719 | 18993761 ~ 19176827 (+) | True | LOC122333031 |
| TU6222 | lncRNA | upstream | 776793 | 18747234 ~ 18747753 (+) | True | G4361 |
| TU6221 | lncRNA | upstream | 801251 | 18723075 ~ 18723295 (+) | True | G4360 |
| TU6219 | lncRNA | upstream | 807451 | 18716874 ~ 18717095 (+) | False | LOC122340556 |
| TU6217 | lncRNA | upstream | 809315 | 18714947 ~ 18715231 (+) | True | G4356 |
| TU6463 | lncRNA | downstream | 49631 | 19574411 ~ 19574760 (+) | True | G4553 |
| TU6501 | lncRNA | downstream | 190773 | 19715553 ~ 19777043 (+) | False | scoca |
| TU6504 | lncRNA | downstream | 218382 | 19743162 ~ 19778083 (+) | True | G4579 |
| TU6498 | lncRNA | downstream | 249781 | 19774561 ~ 19777043 (+) | False | scoca |
| TU6499 | lncRNA | downstream | 249781 | 19774561 ~ 19777043 (+) | False | scoca |
| XM_043244412.1 | mRNA | upstream | 55117 | 19464300 ~ 19469429 (+) | False | irf2a |
| XM_043244404.1 | mRNA | upstream | 55117 | 19464301 ~ 19469429 (+) | True | irf2a |
| XM_043229546.1 | mRNA | upstream | 89824 | 19191093 ~ 19434722 (+) | True | tenm3 |
| XM_043229727.1 | mRNA | upstream | 89824 | 19191093 ~ 19434722 (+) | False | tenm3 |
| XM_043229793.1 | mRNA | upstream | 89824 | 19191093 ~ 19434722 (+) | False | tenm3 |
| XM_043231108.1 | mRNA | downstream | 68 | 19524848 ~ 19526586 (+) | True | sod3b |
| XM_043229485.1 | mRNA | downstream | 5607 | 19530387 ~ 19535903 (+) | True | LOC122331797 |
| XM_043228780.1 | mRNA | downstream | 14551 | 19539331 ~ 19544378 (+) | True | lgi2b |
| XM_043226831.1 | mRNA | downstream | 20085 | 19544865 ~ 19552166 (+) | True | ccdc149b |
| XM_043227587.1 | mRNA | downstream | 20085 | 19544865 ~ 19552166 (+) | False | ccdc149b |
| TU6436 | other | upstream | 2147 | 19521084 ~ 19522399 (+) | True | G4528 |
| unassigned_transcript_101 | other | upstream | 945715 | 18578750 ~ 18578831 (+) | True | trnas-aga |
| XR_006251260.1 | other | upstream | 1241785 | 18247250 ~ 18282761 (+) | False | dclk2a |
| XR_006251261.1 | other | upstream | 1241785 | 18247252 ~ 18282761 (+) | False | dclk2a |
| XR_006251846.1 | other | upstream | 1915705 | 17573121 ~ 17608841 (+) | False | gab1 |
| unassigned_transcript_103 | other | downstream | 587662 | 20112442 ~ 20112514 (+) | True | trnak-cuu |
| TU7127 | other | downstream | 1796685 | 21321465 ~ 21361275 (+) | False | LOC122348864 |
| TU7152 | other | downstream | 2066097 | 21590877 ~ 21620580 (+) | False | rnf24 |
| TU7172 | other | downstream | 2107435 | 21632215 ~ 21635052 (+) | True | G5037 |
| unassigned_transcript_107 | other | downstream | 2359656 | 21884436 ~ 21884508 (+) | True | trnak-uuu |
