RNA id: TU7205



Basic Information


Item Value
RNA id TU7205
length 884
lncRNA type sense_over
GC content 0.34
exon number 1
gene id si:dkey-37g12.1
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21549617 ~ 21564077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGTAAGTTTTacggtaacatttttttttcaggattctctgatgaatgtaaaattcaaaatatgatttgtatgtaacaatgtaacaatttctttattaagaaaaaaaccctTAACATTATTGTATATCAAAACCAAAGTGTTTTCATATATGTatctttatattaattacatttattagaatttcccttttcaattattcaaataaatattagtgcttGTTTGCATTTCAACACACATTCCACTAAGAGTACTGCTAATAACTCAATTCCACCACAGGGCATTTTTGTTGGACTGTATTTTGTAATCTGTCACCCGTATGGACACTGCTGAGAGCAGTTCATTACATTAATAGCTCTCCCATTCCACAGTTGACCCTCTGTGATTCATTCCCCTTCTGGCTTTTAACCAGTCATCTCTATCTTGCATTGCTGGAGCTTTCACTAAAAGCCTTTAACTGATGTACCATATTGACAGCAAACCTCTACAAACTCCAGATTCAGTCTTTTAACAGTCTACAAATTACTGCCAAAAGAGACGGTCCACATCGGCATTACTCCGTCCTTGCTTTCTGGTAACCTTTGCTCCCCTTATCACAGAGGTCgtaaacacacacttttcagACATCTCTGAAAAGACATTTCTGTGTAGAACTGCTGCGTGTTTTGTTAGGGGGAAATAAAAAGGGCATGTTTTAGTGTGCTGTCTGTGCACTTTTGGAGTTAATGGGAAACTTATCTGACTTTGCTAGATTTTGTTCCTGCAGATAATCTTCACTTTCGAACAGAAACGTCTCAGGAGATGAAAGATTAAATCTTTGAACTGTATTCTGTAATATTTGTTCAAAGTTTGGGGATTTAAAGATAAGTGTTGTTGAAAATGTCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7131 lncRNA downstream 139781 20906170 ~ 21410571 (-) False ctnna2
TU7094 lncRNA downstream 831462 20718232 ~ 20718890 (-) False LOC122349798
XR_006251499.1 lncRNA downstream 831479 20711230 ~ 20718873 (-) True LOC122349798
TU7087 lncRNA downstream 838898 20703476 ~ 20711454 (-) False LOC122349798
TU7047 lncRNA downstream 848054 20613916 ~ 20702298 (-) True G4946
TU7183 lncRNA upstream 61683 21612918 ~ 21620581 (-) True G5047
TU7636 lncRNA upstream 492667 22043902 ~ 22044137 (-) True G5327
TU7670 lncRNA upstream 733925 22285160 ~ 22287133 (-) False LOC122348696
TU7671 lncRNA upstream 733983 22285218 ~ 22287133 (-) False LOC122348696
TU7696 lncRNA upstream 797279 22348514 ~ 22382972 (-) False G5366
XM_043236036.1 mRNA downstream 2286 21539766 ~ 21548066 (-) False LOC122342190
XM_043236072.1 mRNA downstream 5489 21539766 ~ 21544863 (-) False LOC122342190
XM_043236119.1 mRNA downstream 5489 21539766 ~ 21544863 (-) True LOC122342190
XM_043244768.1 mRNA downstream 134508 21411863 ~ 21415844 (-) True LOC122348874
XM_043246136.1 mRNA downstream 165428 21381701 ~ 21384924 (-) True LOC122349971
XM_043234681.1 mRNA upstream 565 21551800 ~ 21564076 (-) False si:dkey-37g12.1
XM_043234793.1 mRNA upstream 566 21551801 ~ 21564074 (-) False si:dkey-37g12.1
XM_043234958.1 mRNA upstream 926 21552161 ~ 21564077 (-) False si:dkey-37g12.1
XM_043235439.1 mRNA upstream 16867 21568102 ~ 21577369 (-) True smox
XM_043235318.1 mRNA upstream 71130 21622365 ~ 21663567 (-) True fbxo41
TU7069 other downstream 863612 20683842 ~ 20686740 (-) True G4958
TU6966 other downstream 1181258 20367139 ~ 20369094 (-) False timm10
XR_006250953.1 other downstream 1237404 20290873 ~ 20312948 (-) False zdhhc5a
TU6776 other downstream 1410422 20137072 ~ 20139930 (-) False si:dkey-9i23.16
TU7255 other upstream 166904 21718139 ~ 21723065 (-) False G5104
TU7256 other upstream 167865 21719100 ~ 21723065 (-) False G5104
TU7263 other upstream 168825 21720060 ~ 21766284 (-) True G5104
TU7258 other upstream 170269 21721504 ~ 21723065 (-) False G5104
TU7269 other upstream 173152 21724387 ~ 21772762 (-) True G5108

Expression Profile