Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU7636 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G5327 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 22043902 ~ 22044137 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0050879 | multicellular organismal movement | biological_process |
| GO:0050881 | musculoskeletal movement | biological_process |
| GO:0006936 | muscle contraction | biological_process |
| GO:0006941 | striated muscle contraction | biological_process |
| GO:0003009 | skeletal muscle contraction | biological_process |
| GO:0003010 | voluntary skeletal muscle contraction | biological_process |
| GO:0003012 | muscle system process | biological_process |
| GO:0031444 | slow-twitch skeletal muscle fiber contraction | biological_process |
| GO:0014721 | twitch skeletal muscle contraction | biological_process |
| GO:0099080 | supramolecular complex | cellular_component |
| GO:0099081 | supramolecular polymer | cellular_component |
| GO:0043292 | contractile fiber | cellular_component |
| GO:0044444 | obsolete cytoplasmic part | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0036379 | myofilament | cellular_component |
| GO:0005861 | troponin complex | cellular_component |
| GO:0005865 | striated muscle thin filament | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0099512 | supramolecular fiber | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU7183 | lncRNA | downstream | 423321 | 21612918 ~ 21620581 (-) | True | G5047 |
| TU7205 | lncRNA | downstream | 492667 | 21550352 ~ 21551235 (-) | False | si:dkey-37g12.1 |
| TU7131 | lncRNA | downstream | 633331 | 20906170 ~ 21410571 (-) | False | ctnna2 |
| TU7094 | lncRNA | downstream | 1325012 | 20718232 ~ 20718890 (-) | False | LOC122349798 |
| XR_006251499.1 | lncRNA | downstream | 1325029 | 20711230 ~ 20718873 (-) | True | LOC122349798 |
| TU7670 | lncRNA | upstream | 241023 | 22285160 ~ 22287133 (-) | False | LOC122348696 |
| TU7671 | lncRNA | upstream | 241081 | 22285218 ~ 22287133 (-) | False | LOC122348696 |
| TU7696 | lncRNA | upstream | 304377 | 22348514 ~ 22382972 (-) | False | G5366 |
| TU7704 | lncRNA | upstream | 304377 | 22348514 ~ 22382972 (-) | True | G5366 |
| TU7709 | lncRNA | upstream | 368325 | 22412462 ~ 22413930 (-) | False | G5368 |
| XM_043249473.1 | mRNA | downstream | 92748 | 21946861 ~ 21951154 (-) | True | zgc:111983 |
| XM_043249481.1 | mRNA | downstream | 92806 | 21946861 ~ 21951096 (-) | False | zgc:111983 |
| XM_043238887.1 | mRNA | downstream | 137347 | 21905701 ~ 21906555 (-) | True | LOC122345057 |
| XM_043248130.1 | mRNA | downstream | 138751 | 21901467 ~ 21905151 (-) | True | rps6 |
| XM_043248092.1 | mRNA | downstream | 143376 | 21890352 ~ 21900526 (-) | True | smu1b |
| XM_043249987.1 | mRNA | upstream | 23928 | 22068065 ~ 22072544 (-) | True | ddx39aa |
| XM_043242867.1 | mRNA | upstream | 67375 | 22111512 ~ 22118077 (-) | False | LOC122347503 |
| XM_043242858.1 | mRNA | upstream | 67375 | 22111512 ~ 22118077 (-) | True | LOC122347503 |
| XM_043236762.1 | mRNA | upstream | 75209 | 22119346 ~ 22122849 (-) | True | si:ch73-90k17.1 |
| XM_043240979.1 | mRNA | upstream | 84206 | 22128343 ~ 22132730 (-) | False | f8a |
| unassigned_transcript_106 | other | downstream | 159712 | 21884118 ~ 21884190 (-) | True | trnat-ugu |
| TU7268 | other | downstream | 247464 | 21774634 ~ 21796438 (-) | False | LOC122348907 |
| TU7269 | other | downstream | 271140 | 21724387 ~ 21772762 (-) | True | G5108 |
| TU7263 | other | downstream | 277618 | 21720060 ~ 21766284 (-) | True | G5104 |
| TU7255 | other | downstream | 320837 | 21718139 ~ 21723065 (-) | False | G5104 |
| TU7673 | other | upstream | 215302 | 22259439 ~ 22328929 (-) | True | G5356 |
| TU7773 | other | upstream | 495547 | 22539684 ~ 22550950 (-) | False | atp11a |
| TU7878 | other | upstream | 869763 | 22913900 ~ 22916405 (-) | True | G5468 |
| XR_006251794.1 | other | upstream | 1728486 | 23772623 ~ 23916448 (-) | False | LOC122351696 |
| XR_006251793.1 | other | upstream | 1728486 | 23772623 ~ 23916446 (-) | False | LOC122351696 |
