RNA id: TU7704



Basic Information


Item Value
RNA id TU7704
length 475
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G5366
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22348514 ~ 22382972 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TACAATCCTTAAATATGTCAGCTCATTgaagaaaaactaaagaaaacacTCTATTGATCGTAAATTCTCTTTCTGCTCTAGCTGAGGACGTGATATTCACTCGCTTGTCAGGGAGACTCCagtagtttttgtgtgtgtgtgtgtgtgcgtgcaggaAGTTCCAGGGAAAGACGCAAACGGACTTGATGTGAGTGACTGCATAGTGAGTATTTGGTTTAATTACAGATGGGGCATCatgataatttaacaaaataataacaataacaacaattcTAAAAAGTAATAAAGACTTAAAAATCATGACGGCACGAGTACACGCCTGAGCActcacacacgcaaacacaccaAAAATAACAGTGATgctgcaacacaaacacacacactcactcacacgcgcacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7670 lncRNA downstream 61381 22285160 ~ 22287133 (-) False LOC122348696
TU7671 lncRNA downstream 61381 22285218 ~ 22287133 (-) False LOC122348696
TU7636 lncRNA downstream 304377 22043902 ~ 22044137 (-) True G5327
TU7183 lncRNA downstream 727933 21612918 ~ 21620581 (-) True G5047
TU7205 lncRNA downstream 797279 21550352 ~ 21551235 (-) False si:dkey-37g12.1
TU7709 lncRNA upstream 29490 22412462 ~ 22413930 (-) False G5368
TU7712 lncRNA upstream 29490 22412462 ~ 22414007 (-) True G5368
TU7752 lncRNA upstream 51641 22434613 ~ 22438354 (-) True G5395
TU7716 lncRNA upstream 61986 22444958 ~ 22446648 (-) True G5369
TU7764 lncRNA upstream 143144 22526116 ~ 22526422 (-) True G5404
XM_043244839.1 mRNA downstream 12222 22332974 ~ 22336292 (-) True c1h19orf67
XM_043244559.1 mRNA downstream 55153 22288682 ~ 22293361 (-) False serhl
XM_043244568.1 mRNA downstream 55293 22288682 ~ 22293221 (-) True serhl
XM_043244473.1 mRNA downstream 60993 22273986 ~ 22287521 (-) True LOC122348696
XM_043244482.1 mRNA downstream 67576 22272818 ~ 22280938 (-) False LOC122348696
XM_043234708.1 mRNA upstream 2541 22385513 ~ 22411664 (-) True pnpla6
XM_043234725.1 mRNA upstream 2541 22385513 ~ 22411587 (-) False pnpla6
XM_043234703.1 mRNA upstream 2541 22385513 ~ 22411585 (-) False pnpla6
XM_043234715.1 mRNA upstream 2541 22385513 ~ 22411549 (-) False pnpla6
XM_043234721.1 mRNA upstream 2541 22385513 ~ 22411469 (-) False pnpla6
TU7673 other downstream 19585 22259439 ~ 22328929 (-) True G5356
unassigned_transcript_106 other downstream 464324 21884118 ~ 21884190 (-) True trnat-ugu
TU7268 other downstream 552076 21774634 ~ 21796438 (-) False LOC122348907
TU7269 other downstream 575752 21724387 ~ 21772762 (-) True G5108
TU7258 other downstream 625449 21721504 ~ 21723065 (-) False G5104
TU7773 other upstream 156712 22539684 ~ 22550950 (-) False atp11a
TU7878 other upstream 530928 22913900 ~ 22916405 (-) True G5468
XR_006251794.1 other upstream 1389651 23772623 ~ 23916448 (-) False LOC122351696
XR_006251793.1 other upstream 1389651 23772623 ~ 23916446 (-) False LOC122351696
TU8134 other upstream 1649891 24032863 ~ 24034499 (-) False G5624

Expression Profile