RNA id: TU9030



Basic Information


Item Value
RNA id TU9030
length 312
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G6201
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 25621434 ~ 25621745 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tatgttttttttttttaagtaatatcaGAATGCATGGAAAAACTTACAGTATTTTCTCACATTTACGTGTCTGCCTATTTATTCACTGTTTAATAATGACTCCCCTTTCAGCATAAATGTGCATGTACCCGCATTCACTGTCCAGCAGGTGGAGCCAGGCACTTTGCGTCTTTCAGACTCATGCTATGGAACAAAGTTTTAGCTTGGTTTCAAAGACGGATCCTCCTGAGTGTAGCAGACCTTCTCTGTTGGCCGAGAAACGACTGAGGAAGACTTGAATCCCTCGCTTCGTTGTCTGGTATCTGATGAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9029 lncRNA downstream 930 25620246 ~ 25620504 (-) True G6200
TU8988 lncRNA downstream 116580 25503940 ~ 25504854 (-) True G6165
TU8939 lncRNA downstream 219079 25400384 ~ 25402355 (-) True G6135
TU8938 lncRNA downstream 219079 25401943 ~ 25402355 (-) False G6135
TU8937 lncRNA downstream 222302 25398491 ~ 25399132 (-) True G6134
TU9062 lncRNA upstream 115052 25736797 ~ 25737312 (-) True G6223
TU9628 lncRNA upstream 147162 25768907 ~ 25799273 (-) True G6594
TU9685 lncRNA upstream 209579 25831324 ~ 25858605 (-) False patl1
TU9689 lncRNA upstream 214193 25835938 ~ 25844994 (-) True G6634
TU9691 lncRNA upstream 217106 25838851 ~ 25846530 (-) True G6636
XM_043234897.1 mRNA downstream 42635 25577222 ~ 25578799 (-) True junba
XM_043234909.1 mRNA downstream 52523 25564387 ~ 25568911 (-) False rnaseh2a
XM_043234919.1 mRNA downstream 52851 25564387 ~ 25568583 (-) True rnaseh2a
XM_043234928.1 mRNA downstream 53143 25564387 ~ 25568291 (-) False rnaseh2a
XM_043234942.1 mRNA downstream 57579 25561561 ~ 25563855 (-) True snrpb2
XM_043245021.1 mRNA upstream 66052 25687797 ~ 25701284 (-) True LOC122349099
XM_043251204.1 mRNA upstream 85079 25706824 ~ 25713974 (-) True LOC122353232
XM_043251160.1 mRNA upstream 93185 25714930 ~ 25715704 (-) False LOC122353196
XM_043251183.1 mRNA upstream 94413 25716158 ~ 25727538 (-) True LOC122353214
XM_043251139.1 mRNA upstream 188134 25809879 ~ 25813849 (-) True aptx
TU9017 other downstream 66199 25551749 ~ 25555235 (-) False prokr1a
TU8940 other downstream 219079 25401314 ~ 25402355 (-) False G6135
TU8935 other downstream 221417 25398491 ~ 25400017 (-) False G6134
TU8922 other downstream 313463 25304597 ~ 25307971 (-) False G6124
TU9035 other upstream 92357 25714102 ~ 25715678 (-) True LOC122353196
TU9033 other upstream 92923 25714668 ~ 25715678 (-) False LOC122353196
TU9696 other upstream 238128 25859873 ~ 25860408 (-) False patl1
TU9622 other upstream 509043 26130788 ~ 26135486 (-) False G6592
TU9833 other upstream 795114 26416859 ~ 26417879 (-) False smdt1b

Expression Profile