RNA id: XM_043251160.1



Basic Information


Item Value
RNA id XM_043251160.1
length 555
RNA type mRNA
GC content 0.49
exon number 3
gene id LOC122353196
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 25714102 ~ 25715704 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGGAGACTTTTATTCTATGTCGTGTCCTAAGTCTCTCTGTTTCCGGTTGCGTTCAAGCGATAGAAAATGGCTCAAGGCAAACAGAAATTTAAAGCGCAACGACCCGGAGGAGCTAAAAAGCAACAACAGAAGCCGAAAGGACCGAAGAAAGGAGGAAGGATCATCGCTCCCAAAAAAGCTCAGGTGGTCCAGCAGCAGAAGCTGAAGAAGGGTTTGGAGGTGGCCATCAGGAACAGGATTGAGCACGAAGTCACGCAGAAGGCCAGCACGTCCCTTCACAAGAAACTGAGCGTGCTGAAGACTCCCGCGGGGAAGAGCGGCGGCGCTGGACCTCCAAAACCCGGACCATCCAAGTCCACCTGACACCAGAACACTGCGGGGCCATGGACCGCCGCTAGAGGGCGCCACCGcgctataaatataaatacgtTCACTACTTTCTGTGATAGgtttatttttagaaacagCAAAATATGGTGTGGAATATGACGTATGTGATCTTTTAGACTGTGCttatatttatgcaataaaaCGAGAGAGCATCGTTAGCTTTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9030 lncRNA downstream 93185 25621434 ~ 25621745 (-) True G6201
TU9029 lncRNA downstream 94426 25620246 ~ 25620504 (-) True G6200
TU8988 lncRNA downstream 210076 25503940 ~ 25504854 (-) True G6165
TU8939 lncRNA downstream 312575 25400384 ~ 25402355 (-) True G6135
TU9062 lncRNA upstream 21093 25736797 ~ 25737312 (-) True G6223
TU9628 lncRNA upstream 53203 25768907 ~ 25799273 (-) True G6594
TU9685 lncRNA upstream 115620 25831324 ~ 25858605 (-) False patl1
TU9689 lncRNA upstream 120234 25835938 ~ 25844994 (-) True G6634
TU9691 lncRNA upstream 123147 25838851 ~ 25846530 (-) True G6636
XM_043251204.1 mRNA downstream 956 25706824 ~ 25713974 (-) True LOC122353232
XM_043245021.1 mRNA downstream 13646 25687797 ~ 25701284 (-) True LOC122349099
XM_043234897.1 mRNA downstream 136131 25577222 ~ 25578799 (-) True junba
XM_043234909.1 mRNA downstream 146019 25564387 ~ 25568911 (-) False rnaseh2a
XM_043251183.1 mRNA upstream 454 25716158 ~ 25727538 (-) True LOC122353214
XM_043251139.1 mRNA upstream 94175 25809879 ~ 25813849 (-) True aptx
XM_043251149.1 mRNA upstream 94175 25809879 ~ 25813565 (-) False aptx
XM_043245059.1 mRNA upstream 141934 25857638 ~ 25863787 (-) True patl1
XM_043237101.1 mRNA upstream 353472 26069176 ~ 26076862 (-) True il15
TU9017 other downstream 159695 25551749 ~ 25555235 (-) False prokr1a
TU8940 other downstream 312575 25401314 ~ 25402355 (-) False G6135
TU8935 other downstream 314913 25398491 ~ 25400017 (-) False G6134
TU8922 other downstream 406959 25304597 ~ 25307971 (-) False G6124
TU9696 other upstream 144169 25859873 ~ 25860408 (-) False patl1
TU9622 other upstream 415084 26130788 ~ 26135486 (-) False G6592
TU9833 other upstream 701155 26416859 ~ 26417879 (-) False smdt1b
TU9834 other upstream 701179 26416883 ~ 26417879 (-) False smdt1b
TU10045 other upstream 1086206 26801910 ~ 26802925 (-) True c1h19orf53

Expression Profile