RNA id: TU9622


Basic Information

Item Value
RNA id TU9622
length 2908
RNA type TUCP
GC content 0.37
exon number 5
gene id G6592
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26130788 ~ 26135486 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cacatatatgctgACTGAACGTTTTTCTGGATGTCATAAAATGAGTTATGTAGAATTAATTTAGGTTTTTCAGTATGCAAACGTGCTTTTTAATGATTGCTTTATGCACGTCGCTCTTATTCCAGATGAAGTACACAGTCACCACAAAGACTTCCAAAAGTAGTATAAAGTTGTTTTATTGAAGCACGTGTGCTCATCTCCATGTGTTTATAGGTTTCCAGTTATGAGGCAATCTCACTTTTTAGGTCGTCCCAGGGCTATTTGTTGAGTATTTAGGGTTAAATAGACATTAAGGTAAATTGTTGCTTTTAacaaagcacaaattgcttaaaaatgaatataaatattacataaacattatgTACATTAAGGGGGGGGTTCAGAAGACCCTTCCATTTCAATTTGTGCGTCATGTGATCAATCATCGTGCCGAGCAGCTGTTCTTCATAGTGGTGTAACCTGAAGGAGTAAGATGTGTGACGTTCGGGTCAGATTCTCCCGTTCTGTTGCCTGTTGGAGCTGGAGGTCGGCTCCGGTTCTCGTCCCGTCGGAGGGGTTGAAACAGCCGCTCGTGTGAAAGGATCCGGGTCTGAGGTGAAGGTCTTAGGCCGCGGCCTCGATTCTGCTCCTGGACATCATCATGGCCCGCTTGAGCTGCTCGAACGACACGAACATCACCACGTTCCAGGAGCCCTCTTTGGTCATCATGGTCCAGGCACAGTTGAGGGAGCTGCGGTACTGTCCGGGAGGAGAGTTCATGTAGCGCGTCTTCACCACGTCCACAGGAGACGCGATCACTGTCGTGATGAAACCCGCTCCGAACGCAGACACGAAATGACACGGAAGATTGTCTGGAGGCAGAAACATGgtgttttttataaaatatctatctatctatcatctatatatgtatctatctatctatctatctgtttatctgtctatctatgtatctatcatctatctatctatctattaaaCAAAAGTCTAGGTTgacttattttttgttcattttatttgattaatagtCACCTTACTGTCCTTCTATTTTCTGAtcttagttttagttattttatctgcttatatatatatatatatatatatatatatatatatatatatatatacaaattgtatttgtatttcaaatctgtattttattaaattaaatagttgCCTTTTAAACTGCCTTTGcatctgaattttttttctatttacaaatattacaagtCTAGTgttattttgctgttatttatataaaatagcatttattaacgTTTTCAACGAGCctctaattatatatttaattattgattttaatttgctttagtaattttgttatgagcttttttttccaatcggcttttatttttatttcagttgtagtcattttaaaactgcgtgcgtgtgcgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgcgcgcgtgtgtgtgcgtgtgtgcgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaaaccTCAGCACACCTTTGCCCTGGTTTTACAGGCTTTCACTACAAAAAGTGCTGATGGCATTAAGAGCAGAGCGAGGCCTGAGCCGATCAGAGTGCTATCTTATCTGGTGAAAGTGGTTCTAACAGGTTTCAAGCTGGTTATTAGTGGTGAGAGACTGTGCTTTCGTCCAATCACAGAAGCGTCTGCCGCGTCTCCTCGTGAACCCGGCGCGCGGCTGACAAAGGTCTGGAGTTTTGGGAAACACTGACTGTTTTCATGAATCGAATGATTCTGATTCCTGCCTGATAAAAAACGCTAAACAGAACGGAGACCGGAAACGTCCTGTTTGCTCGACTCTCTGACTCGTTAGGGTCCCTGCGTGGGATTTCTTACCCGACAAGAGCTTGTGTTTGAGAATGGCTTCTTTGATGAGATCGTAGGACACCAGCTCGGTGCAGTTGACCAGAGCGTTCCTTGTGATGTTGGGGAGAGTCCTTTCCACAAGCCCCGGAGGCCCTCGAGCTGGAAGATCTGTCTGTAGGCCTGCATGGTGCCGTTGTAGCGCCTGCCCACCCCCTGCAGGTTCATCTGGGCCTGGAAGCGCACCTTCACCACGTCTGTGGGCTGAGCCACGGACACGGCCAGCGCTCCGGTGGTGCAGCCCGCCAGGATCCTGAAGCCCACGTTGGGGTCTGCAAGGCAAAGGAGAGCCTTTCACGTTCATTCGAGCGCCTTCGTCTTCGTCCTTAACCCTCTGGGAGACACAGCCGAGACTCTGTTTCTACCGAAAGGAGGCGGTTCTGGACTCACTGTCTTTGCCGCGCGTGTAGAAGCTCTTGACGTTGTCGTAGAGGCCGATTCGGATGGAGGCGAAGGCCATCTGTCTCTGAAGCCCCGCGACCAGGCCGTTGTAGAGCGAGCGCGGCCCCTCCGTTCTCACCATGGTGCTGATGGTCCCAAACACCCCCCGGtaccggatgcccttggctgcgCCCGTCGTCGCTTTCTCTCCCTGGATCTGGAGGAAAACACAGAGAGACGGTGATGGGAGTCAACCAGAGGCGCAATACTGCTGCTCTATAACAAGAATATATCACAGGTGTGTAAtaatcatcaaataaataaaaaacgctataatgctacttttaaaaatttaataataataatcttgtttttgacaaaaatttTGAACAATTATccaattaaaatagaaattaatataatagattaattacatattattttaaacctaCTATTTAATATACGATATTTCAATAGATTATTGGTGCAAAAAGATAATAATGGATTATAATATGATATCTAAAACAACCAAATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9739 lncRNA downstream 34531 26092009 ~ 26096257 (-) True G6670
TU9757 lncRNA downstream 64602 26064559 ~ 26066186 (-) True G6687
TU9715 lncRNA downstream 191937 25938421 ~ 25938851 (-) True G6652
TU9713 lncRNA downstream 212003 25918570 ~ 25918785 (-) True G6650
TU9685 lncRNA downstream 272183 25831324 ~ 25858605 (-) False patl1
TU9630 lncRNA upstream 53572 26189058 ~ 26190510 (-) True G6596
TU9841 lncRNA upstream 228186 26363672 ~ 26367603 (-) True G6741
TU9848 lncRNA upstream 233464 26368950 ~ 26369519 (-) True G6747
TU9850 lncRNA upstream 238176 26373662 ~ 26374623 (-) True G6749
TU9890 lncRNA upstream 309411 26444897 ~ 26446738 (-) True G6769
XM_043235457.1 mRNA downstream 47604 26077265 ~ 26083184 (-) True znf330
XM_043235465.1 mRNA downstream 47630 26077265 ~ 26083158 (-) False znf330
XM_043237101.1 mRNA downstream 53926 26069176 ~ 26076862 (-) True il15
XM_043237109.1 mRNA downstream 53927 26069176 ~ 26076861 (-) False il15
XM_043237118.1 mRNA downstream 53931 26069176 ~ 26076857 (-) False il15
XM_043250925.1 mRNA upstream 220 26135706 ~ 26141269 (-) False elmod2
XM_043250917.1 mRNA upstream 220 26135706 ~ 26141177 (-) True elmod2
XM_043231969.1 mRNA upstream 6298 26141784 ~ 26147822 (-) True zgc:66455
XM_043232033.1 mRNA upstream 12446 26147932 ~ 26155748 (-) True b3gnt2a
XM_043232131.1 mRNA upstream 12446 26147932 ~ 26154975 (-) False b3gnt2a
TU9696 other downstream 270380 25859873 ~ 25860408 (-) False patl1
TU9035 other downstream 415110 25714102 ~ 25715678 (-) True LOC122353196
TU9033 other downstream 415110 25714668 ~ 25715678 (-) False LOC122353196
TU9017 other downstream 575553 25551749 ~ 25555235 (-) False prokr1a
TU8940 other downstream 728433 25401314 ~ 25402355 (-) False G6135
TU9833 other upstream 281373 26416859 ~ 26417879 (-) False smdt1b
TU9834 other upstream 281397 26416883 ~ 26417879 (-) False smdt1b
TU10045 other upstream 666424 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other upstream 666684 26802170 ~ 26802925 (-) False c1h19orf53
TU10183 other upstream 1062419 27197905 ~ 27202567 (-) False LOC122344379

Expression Profile