RNA id: TU9936



Basic Information


Item Value
RNA id TU9936
length 238
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G6801
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26513569 ~ 26513920 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCCTTTTTACACAAAGTGGCAAGAGTCTGATAACTGCACtcgcattaaaaacaaatacataaacacaggTTCTCAATGcgtgatgtcatttcctcccCAGAAAGGAAAAGGAATATACAGTAGATACTGTAAATACCCAGGGTTCTcacgcgtgcgtgtgtgtgtaaaaacattgtttatatatcacatatatttacaaatcatACAAATTAGAGAAATATAATAGATATATTCGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9934 lncRNA downstream 611 26512392 ~ 26512958 (-) True G6799
TU9901 lncRNA downstream 54102 26454250 ~ 26459467 (-) False LOC122353745
TU9890 lncRNA downstream 66831 26444897 ~ 26446738 (-) True G6769
TU9850 lncRNA downstream 138946 26373662 ~ 26374623 (-) True G6749
TU9848 lncRNA downstream 144050 26368950 ~ 26369519 (-) True G6747
TU9973 lncRNA upstream 139322 26653242 ~ 26706828 (-) True G6827
TU9983 lncRNA upstream 175434 26689354 ~ 26690490 (-) True G6834
TU10056 lncRNA upstream 234803 26748723 ~ 26748956 (-) True G6873
TU10058 lncRNA upstream 240812 26754732 ~ 26758292 (-) True G6874
TU10059 lncRNA upstream 243278 26757198 ~ 26758292 (-) False G6874
XM_043251823.1 mRNA downstream 32006 26476652 ~ 26481563 (-) False nthl1
XM_043251895.1 mRNA downstream 32006 26476652 ~ 26481563 (-) False nthl1
XM_043251758.1 mRNA downstream 32006 26476652 ~ 26481563 (-) True nthl1
XM_043251656.1 mRNA downstream 38617 26458763 ~ 26474952 (-) True LOC122353745
XM_043238406.1 mRNA downstream 73045 26426671 ~ 26440524 (-) True rfx1b
XM_043240944.1 mRNA upstream 12970 26526890 ~ 26606252 (-) True pkd1a
XM_043234154.1 mRNA upstream 125264 26639184 ~ 26643244 (-) True wu:fj19g03
XM_043234189.1 mRNA upstream 125264 26639184 ~ 26642073 (-) False wu:fj19g03
XM_043249798.1 mRNA upstream 166131 26680051 ~ 26684473 (-) True tekt4
XM_043239620.1 mRNA upstream 198926 26712846 ~ 26717701 (-) True exosc1
TU9833 other downstream 95690 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 95690 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 378083 26130788 ~ 26135486 (-) False G6592
TU9696 other downstream 653161 25859873 ~ 25860408 (-) False patl1
TU9033 other downstream 797891 25714668 ~ 25715678 (-) False LOC122353196
TU10045 other upstream 287990 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other upstream 288250 26802170 ~ 26802925 (-) False c1h19orf53
TU10183 other upstream 683985 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 727304 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 1240862 27754782 ~ 27939452 (-) False G7105

Expression Profile