RNA id: XM_043216551.1


Basic Information

Item Value
RNA id XM_043216551.1
length 1731
RNA type mRNA
GC content 0.42
exon number 5
gene id LOC122322914
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29085844 ~ 29088593 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCCAGATCATCAACCAAATTGTGATCATCCAGAGAGATTTGGTACAAGGTGTCAGGTTATATGTATAAGTGTTTTcctggacgctgttactgggagaggATGGCGTTGGGACAGAAATTTCAGTGACATAAAGGAGGAGGAAAGGAGGAAGTTACTGTCGATTTGGATACAACACCAAATCATAGAGTGTGTTTTGCACTGCTAATGGATTCACTGTCTGGCACAATGATAACAAAACTGCTATATCTGTCCCTTCACACTGCTCTAATAGAGTAGGAGTGTATCTGGACTGGTCTGTCATTCTACAGTCCACTCACACACTTAATCAACACCACATTCACTAAATCTCCCTACGCTGGACTTAGGGTTTATGATTCCTCAGTATCTCTGTGTGAGATATGTTCAACTCGGTAATAACGCAAAATATGGACATGAAGAACCatcaaagttgaaaaaaaatattttttcattaatcaacTGAAAACCATGACACTGATTACATTTAGCAGAACTACAGTCTTAAATGCAAGGAGGCATCATGTGATGTTTCAGGAGGCCTGCTCTGTGGGAGTTAGAGAATCCCAACAtattgagaaaacaaaaactttcacaAAGTCACAGATAACATACGTGAACTTATACTCATGACTCAGAAAATACTGATGATAGTAAATGTAGCatactgagaaaacaaaaacgttCACAACCTTAGCCTTGAGTCTGTGTGGATTCTGCATGTTTCTGTTGATTGTGAACATGTAATCGctgttaaacatttctttaaagacAGAGGAGGAGCCTGCAGTCTTACCGATATAAAGAGTCCTTGCATCAGACTAAACAGAATAAACAGTGACTTACAATCTGGGGAGAGATTTAGAAGATGACAATGATATTATTTTTGGTGGCACTTTTCCCGGTTGTACTGGGCAGTGACTGTAAGTTCATGCAGTTTGACTGCTCTGACGTCTACAACTCAGGACAGACGGCCAGCGGGATCTACTCCATCTATCCTGCAGGAGATGTTCCTGTCTGGGTTCACTGTGACATGATCTCAGATGGGAAAGATGAAGATAAAGGAGGATGGACGGTGATTCAGAGGAGAATGGATGGCAGCGTGAATTTCTATCGGCCGTGGGATCAGTACAAGAGAGGATTTGGGAATATAGAGAGTGAATACTGGCTGGggcTGGAGAACATGTATCAGCTGACACGAAACGGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCAGTACTCGTCTTTCTCTGTGGATTGTGAATGTTCTGGATATAAACTACAAGTTTCAGGGTTCACTGATGGAGGAGCAGGCAACTCTTTGATTGTCCACAACAATCAGAAATTCACAACGTTTGACAAGGATCAAGACGGCCATGCTGATAACTGTGCTAGAATGCGTCTCGGGGGGTTTTGGTACGCAAGCTGTCTGGAGGCAAACCCCAACGGTGTGTACTTATGGGGAAACGATAACACTAATTCCGCCATTGGTGTTGTCTGGTCGACCTGGAAAAACAATTTCACTTACAGTATGAAGTCTATTAGCATGAAAATCAGACGTGTATCTTAGAGACTTTAATGATTCCAGGAGCTATTGGTCTtataatatatgctttatatcaTACCTGTGCTAAAGAGTAAATTATGTAGGTCAGGGTGACTTTAATAAACTCCAGCACTGAaagca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11218 lncRNA downstream 68688 29015665 ~ 29017156 (-) True G7591
TU11205 lncRNA downstream 104726 28971894 ~ 28981118 (-) True G7579
TU11154 lncRNA downstream 141226 28943997 ~ 28944618 (-) False LOC122324333
TU11146 lncRNA downstream 284179 28792644 ~ 28801665 (-) True G7551
TU11145 lncRNA downstream 284988 28790466 ~ 28800856 (-) True G7550
TU11167 lncRNA upstream 26425 29115018 ~ 29131947 (-) False G7563
TU11201 lncRNA upstream 26903 29115496 ~ 29124052 (-) True G7575
TU11169 lncRNA upstream 30410 29119003 ~ 29132092 (-) False G7563
TU11224 lncRNA upstream 43875 29132468 ~ 29152545 (-) False LOC122362981
TU11200 lncRNA upstream 68251 29156844 ~ 29158718 (-) True G7574
XM_043255514.1 mRNA downstream 386 29076419 ~ 29085458 (-) False LOC122356586
XM_043255602.1 mRNA downstream 697 29076419 ~ 29085147 (-) True LOC122356586
XM_043264729.1 mRNA downstream 11148 29072735 ~ 29074696 (-) True LOC122362918
XM_043259012.1 mRNA downstream 20297 29062167 ~ 29065547 (-) True LOC122358964
XM_043219627.1 mRNA downstream 24170 29050774 ~ 29061674 (-) True dnm2b
XM_043218371.1 mRNA upstream 553 29089146 ~ 29090774 (-) True LOC122324118
XM_043219910.1 mRNA upstream 13093 29101686 ~ 29111713 (-) False LOC122325037
XM_043219192.1 mRNA upstream 38327 29126920 ~ 29128828 (-) True ubl5
XM_043264857.1 mRNA upstream 45351 29133944 ~ 29137075 (-) True LOC122362981
XM_043264977.1 mRNA upstream 50849 29139442 ~ 29141023 (-) True LOC122363056
TU11106 other downstream 560293 28523705 ~ 28525551 (-) True G7527
TU11094 other downstream 639253 28406182 ~ 28446591 (-) True G7515
TU11081 other downstream 693791 28391039 ~ 28392053 (-) True G7508
TU11020 other downstream 837321 28244128 ~ 28248523 (-) True G7475
TU10496 other downstream 1009400 28074648 ~ 28076444 (-) False LOC122349330
TU11196 other upstream 17721 29106314 ~ 29112734 (-) True LOC122325037
TU11164 other upstream 38178 29126771 ~ 29128775 (-) False G7563
TU11174 other upstream 38178 29126771 ~ 29128775 (-) False G7563
TU11193 other upstream 213214 29301807 ~ 29310598 (-) True G7569
TU11395 other upstream 337701 29426294 ~ 29434213 (-) False LOC122354733

Expression Profile