RNA id: XM_043230871.1


Basic Information

Item Value
RNA id XM_043230871.1
length 2206
RNA type mRNA
GC content 0.45
exon number 14
gene id slc34a2a
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8680589 ~ 8686545 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCGTTTGGACGGTGTTTGAGAAGCCAACACGGGCAAGCAGACTATACCTCAGGCAATGGCACCACAAACAAAGCAAGAGAATGAATCTGAGGGGAAGCCTACAGAAACACTTGATGTTCCCAGAGAGAAGTCTCTCTCCATGGCCCCTGCTGTCTCCACAGCGGCTCTAATAGAGGATGATCCCTGGGACATGCCTGAATTGCAGGACACTGGAGTTAAATGGGCAGATCTGGACACGAAAGGGAAGATCTTGAGAGTTGTAACCACAGCAGCGAGCTAGCTGATTCTGCTGCTTGGTTTGCTCTACATGTTTGTTTGCTCACTGGACATCCTCAGCTCAGCTTTCCAGCTTGTTGGAGgtaaggCAGCAGGGGACATTTTCCAGGAGAATACAGTGTTATCAAACCCTTTGGCAGGCCTGGTTATCGGGATGCTGGTAACGCTCCTGGTCCAGAGCTCCAGCACTTCCTCGTCTATTGTGGTCAGCATGGTCTCCTCCGGATTGCTGGAGGTCTCTACTGCTGTTCCTATTATTATGGGGACTAACATCGGCACATCAGTCACAAATACTGTTGTCGCCATGACACAAGTTGGCGACCGGAACAAATTCCGCAGGGCATTTGCGGGAGCCACCGTGCACGATTTTTTCAACTGGCTTTCTGTCCTGGTGCTTTTGCCACTGGAAGTTGCCACAGGTTACCTCGTGAAGCTCACAGATCTCATAGTCAAATCATTTAATATCCAGAGTGGAGAAAATGCACCAGCCCTTCTGAATGTCATCACTGACCCACTCACCAATTCTATCATTGAGctgGATGAATCTGTGATAAGCGGCATTGCAATTGAGACCTCAAGCCAAAACAAATCTCTCATCAAGATCTGGTGTCAGACTGTCTCAAACACAACTGTCCAGAATGTGACGGAATCGAGCTGCAGTGACGCCCCTTGTTGGGAACTGAAAAATGTCACAGAAATTATTAACATCAAAAAATGCAATCACATCTTTGTGAACGCAAACCTTTCTGACCTGGCGGTGGGTCTGATTTTACTGGCTGGTTCTCTGCTCATCCTGTGCACTTGCCTCATTTTAATCGTGAAACTGCTCAACTCGATGCTCAAGGGCCAGGTTGCTGTCATCATCAAGAAGATAATGAACACTGattttccatttccatttgcaTGGCTGACTGGATACATTGCAATTGTGGTTGGTGCAGGAATGACTTTTATTGTCCAGAGCAGTTCTGTCTTTACCTCGGCTATAACTCCTCTTGTTGGTATTGGTGTTATAAAGATTGAAAGGGCATATCCTCTCCTGGGATCCAATATCGGAACAACTACTACTGCAATATTAGCCGCCATGGCTAGTCCAGGGGAAACACTTGGAAATTCATTACAGATCGCCTTAGTTCATCTCTTCTTCAACCTCTCTGGGATTGTGCTGTGGTACCCAATCCCCTTCACACGTCTCCCCATTCGAATGGCAAAAGCTCTTGGCCAGCTAACAGCTCAATACCGCTGGTTTTCGGGCTTTTACATCATCGCCTGCTTCTTCGCTTTCCCTCTGTTGGTCTTTGGCCTGTCTTTGGCTGGTTGGCAGGTCCTCGTGGGAGTTCTTGTTCCAATAGTAGCCGTTCTGATCTTTGTTatcattgtaaacattttacGGAAGCACAAACCTCATTGGCTTCCTTCTGCTCTCCGTTCTTGGGAATTTCTTCCTCTATGGGCCCACTCTCTTGAACCGTGGGATAGAGTAGTTACCGTAATGGCCGCtcgctgctgctgttgctgcaaGTGCTGCAATGTTACGGAAGAAGACAAAGAGATGGGACAAGATGAAAATAAAGATCAAGAAATTGAAATGTATGACAATCCGACAATGACTGTTGAGATCAAGGAGGCCAAGAAAACATCAGACAGTTGTGAAATCCTCAAGGCAACCTCTTTATAGATAAACTGAGCATTATAGGTTATTACTGGACATATCCAACTCAAACTGGTTTTGATTTTGAACACCTGCAGACGACAGGTTATATCAGTGGACTTCAGAGCAAGAATAAAGAGGAaagcaatatttcatttaaacatttatttttaaagttgtaCATTTATATTGCTTCTTATATTGAAATTTTTATACAAAGATGCTATTTTGTACAggatattgttattgttaaatacaCAATCTTATGTTACACATTA

Function

GO:

id name namespace
GO:0035435 phosphate ion transmembrane transport biological_process
GO:0044341 sodium-dependent phosphate transport biological_process
GO:0016324 apical plasma membrane cellular_component

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2833 lncRNA upstream 46190 8631472 ~ 8634399 (+) False ppp2r2ca
TU2752 lncRNA upstream 102228 8525581 ~ 8578361 (+) True G1902
TU2721 lncRNA upstream 206068 8395325 ~ 8474521 (+) True G1885
TU2668 lncRNA upstream 694974 7954711 ~ 7985615 (+) False pcdh10a
TU2551 lncRNA upstream 866938 7812153 ~ 7813651 (+) True G1754
TU2866 lncRNA downstream 9412 8695957 ~ 8697410 (+) True G1968
TU2873 lncRNA downstream 25629 8712174 ~ 8714035 (+) True G1971
TU2880 lncRNA downstream 43512 8730057 ~ 8730394 (+) True G1977
TU2882 lncRNA downstream 54287 8740832 ~ 8742521 (+) True G1979
XR_006251869.1 lncRNA downstream 344278 9030823 ~ 9031823 (+) True LOC122352408
XM_043248227.1 mRNA upstream 6936 8669396 ~ 8673653 (+) True chic2
XM_043246918.1 mRNA upstream 11970 8660757 ~ 8668619 (+) True fip1l1b
XM_043227086.1 mRNA downstream 4595 8691140 ~ 8694549 (+) True rbpja
XM_043228024.1 mRNA downstream 13914 8700459 ~ 8705873 (+) True stim2a
XM_043236629.1 mRNA downstream 75594 8762139 ~ 8780164 (+) True LOC122342651
XM_043246377.1 mRNA downstream 113772 8800317 ~ 8802624 (+) True LOC122350130
XM_043250318.1 mRNA downstream 356952 9043497 ~ 9044968 (+) True LOC122352717
TU2774 other upstream 72875 8606828 ~ 8607714 (+) False cxcl8a
unassigned_transcript_3 other upstream 217245 8463272 ~ 8463344 (+) True trnaa-agc_1
unassigned_transcript_2 other upstream 218138 8462379 ~ 8462451 (+) True trnaa-agc
TU2530 other upstream 959164 7720319 ~ 7721425 (+) False spink4
TU2312 other upstream 1528369 7147137 ~ 7152220 (+) True mpc2a
TU2848 other downstream 13895 8700440 ~ 8701372 (+) False stim2a
TU2886 other downstream 84563 8771108 ~ 8778892 (+) False LOC122342651
TU3004 other downstream 348541 9035086 ~ 9035600 (+) True G2063
TU3085 other downstream 721860 9408405 ~ 9412437 (+) True G2125
XR_006252046.1 other downstream 1108654 9795199 ~ 9795414 (+) True LOC122353673

Expression Profile