RNA id: XM_043233726.1


Basic Information

Item Value
RNA id XM_043233726.1
length 2577
RNA type mRNA
GC content 0.45
exon number 7
gene id get3
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31739785 ~ 31745699 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGTCGCTGCCGTCTCGGAGCCAAAATGGCGGAGTGCGCGGCTGCCAATTTGGTGTATTCCGACTGACTTGAGCGCAAGATGGCAGCTTCGGTGGAAGACGAGTTTGAGGATGCGCCTGATGTAGAGCCTTTAGAGCCGACATTAAAGAATATTATAGAGCAGAAATCACTCAAATGGATATTTGTCGGTGGTAAAGGTGGCGTGGGCAAGACAACATGCAGCTGCAGTCTGGCGGTTCAGTTAGCCGCGGTGCGAGAGAGCGTCCTCATCATATCCACAGATCCAGCACACAACATCTCAGATGCCTTCGACCAGAAGTTCTCCAAGGTGCCCACCAAAGTCAAGGGCTACGACAACCTTTTTGCCATGgagatCGACCCCAGTCTGGGTGTGGCGGAGCTCCCCGATGAGTTCTTCGAGGAGGACAACATGCTCAGTATGGGGAAGAAGATGATGCAGGAAGCCATGAGCGCTTTTCCCGGCATCGACGAGGCCATGAGCTACGCAGAGGTCATGAGGTTAGTGAAAGGCATGAATTTCTCAGTGGTTGTATTCGACACAGCCCCTACGGGACACACACTGCGTCTGCTCAACTTCCCCACCATCGTGGAGAGAGGACTGGGCCGCCTCATGCAGATCAAGAACCAGATCAGCCCCTTCATCTCACAGATGTGTAACATGTTGGGCCTGGGAGACATGAATGCTGATCAGCTGGCGTCTAAACTGGAGGAGACGCTCCCTGTCATCCGCTCCGTCAGCGAGCAGTTCAAGGACCCGGAGCAGACGACGTTTATCTGCGTGTGCATCGCAGAGTTCCTGTCTCTGTACGAGACGGAGCGCTTGATTCAGGAGCTGGCTAAGTGTCGCATCGACACGCATAACATAATCGTCAACCAGCTGGTTTTCCCCGACAGCGAGCGGCCCTGCAAGATGTGTGAAGCCCGACACAAGATTCAGTCCAAGTATCTGGACCAGatggaGGATTTATATGAAGATTTCCACATAGTAAAGTTGCCTCTGCTGCCTCACGAGGTTCGAGGAGCAGACAAGGTCAACACTTTCTCCAAGCAGCTGCTGGAGCCCTACAGCCCGCCCAAGAAGTGACTGAAATGATCTCCACGGATCAATCATCGCATCCCTGGCCTCCGATACAAGCATCCCCCTGGTGTTCACATCTCCACACACACCTTTATTTCCCCTCTCGCTGTCTCTACTCTCTCTGGTTTTCTGGTCATGTTGCTCCAGTGATCCGTTATGAATGTCGGCTGTGAATTAAACGGCCTCTTTAGAAACAAAGTCTTGATGGTTTATGTTGCTTTGTGATGGTGTATTTAAGCTTAGGAAACGCTCATTCCTGATGCGTGTTCAAGAAAGGAGATTCATATTGATATCACCACAGGAATGTACAACTGGACTCGGTGGTTGAACATGAGTAGTATCAGTCTAAATGTCTGCCACTAGTACAGTTTTACCTGGCTCATCTGATTTAGGATCAGTGAATGATACCGTAAGCTTATGTTTCAGTTTCAGATTCAGGTCAGACTTTATTTTGGTTTCTGATTTGGGCTGCATTTCTCGAAAGCATCGTAAGCCTAAGTACATCTTGCACCAATTGCCACCAATAATGCTATGATCAACTTAGGCTTACAATGCTTTCCCGAAACTCAAACCTGATCAGTATTGATGTTCAATGAGAGGGTCCAAACATTGTGGGATGATGGATATTTAgcgatttaaagggatagttctcccctctttttttttttttttttttccactgtcaTGGGATTTTTTTCTAGGCTTTTAATGAAAATCAAAATTcccttttgtgtttcagaaaaaggATAAACAAGCGTACAATCTTGTAGAAACAAGGTTGAGTAAATACATGACTACGTTTtaattttcgggtgaactatgcctttaaacgTACACTTAATTGACCTTACACTTAGCGAACCGATCTGTAATTACTGTGTACAAACATTGTGATTCAACTtacctaatttaattttttgcagtTAAAGTGATGTATTTATAATCATTAGACTTGTAATGATTAAGAGAATTTTCTTTCAGATAATCtttaactacatttatttgagagACGTCTGTTTCTGGTTCTGGGTTGTGAAGCGTATGTAGATGCATTGTTCTTCCTCTCACTTCTGTTCTTCTTATGATTCGGCAGTAACGTCTGCATGCATCAAaacacaggaacacacacacacacacacacacacttcctacGAGGAGATCAGGAGCTTGTTTAAATACACTGCATCCTGTCAGCCAGCACGTCTATTACTCGATACTATATCGTGCCGGTTAAGTGTGTTTTCCTGCTTTTATCATCCGGTGAATGCAGTGGGCTCTTTAGTTCATGACAACCAGGGACAAGAACTCACAAACCCGACGTAGTATATCAGACAGAAAGATTCGGATCTTTTATCAGTTATTAGTCAAGTTTCTTTGTTCTCTTATTACTTGTTACTGCCTTTGCAAAgttggcttcttttttttagaaGCACACCGagtttcaaagcaaataaaaacactgtccTCCATCTACTGCA

Function

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0006810 transport biological_process
GO:0045048 protein insertion into ER membrane biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016887 ATPase activity molecular_function

KEGG:

id description
K01551 arsA, ASNA1, GET3; arsenite/tail-anchored protein-transporting ATPase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12122 lncRNA downstream 111786 31626970 ~ 31627999 (-) False LOC122349752
TU12127 lncRNA downstream 111786 31626970 ~ 31627999 (-) False LOC122349752
TU12118 lncRNA downstream 113370 31622674 ~ 31626415 (-) False LOC122349741
XM_043233764.1 mRNA downstream 4852 31728088 ~ 31734933 (-) True best2
XM_043223784.1 mRNA downstream 78182 31634401 ~ 31661603 (-) True LOC122327810
XM_043245898.1 mRNA downstream 109765 31626903 ~ 31630020 (-) True LOC122349752
XM_043245889.1 mRNA downstream 113101 31622873 ~ 31626684 (-) True LOC122349741
XM_043237501.1 mRNA downstream 137344 31595831 ~ 31602441 (-) True glb1
XM_043233753.1 mRNA upstream 263 31745962 ~ 31750050 (-) True rnf11a
TU12124 other downstream 109813 31626970 ~ 31629972 (-) False LOC122349752
TU12119 other downstream 113370 31622674 ~ 31626415 (-) False LOC122349741
TU12112 other downstream 113962 31622674 ~ 31625823 (-) False LOC122349741
TU12077 other downstream 185750 31550186 ~ 31554035 (-) True G8089
TU12079 other downstream 202369 31532069 ~ 31537416 (-) True G8091

Expression Profile