RNA id: XM_043236389.1


Basic Information

Item Value
RNA id XM_043236389.1
length 1744
RNA type mRNA
GC content 0.48
exon number 11
gene id mettl14
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11923120 ~ 11926822 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GATGACGTCAAATCCGTGCGACGGCACCTCACGTTGAGGTTTTCAATGAATTCCTGGTGCGCTATTGTTTTCACCTAATATTTGTGTAAGGAACTACTTCCCTGTAAAACATCATCGACATGAACAGCCGGTTGCAAGAAATACGCGAGAGACAGAAGCTCAGGAGGCAGCTTCTTGCACAACAGCTCGGCGCAGACAGTCCCGACAGCATCGGCGCTGTTCTCAACAgtaaagatgaacaaaaagaGATCGAAGAGACCAGAGAGACGTGCAGAGCATCGTTTGACACATCTGTTCCTGGTGCTAAAAGAAAGTGTCTCATTGATGGTGAAGACTCAGAGGAGGATGTGGAGGAGCAGAAGGAAGACGTTGAGCCCCAGCAGCAGGAGGAGAGTGGACCGTATGAAGAGGTGTACAAAGACTCCAGCACCTTCCTAAAGGGCACTCAGAGTTTAAATCCTCACAATGATTACTGCCAACACTTTGTGGACACAGGTCATAGACCGCAGAACTTTATCAGAGATGGAGGTCTGGCTGACAGATTTGAGGAGTACCCAAAACAAAGAGAGCTCATTCGACTGAAGGATGAGCTCATCGCTGCCACCAACACCCCACCCATGTATCTGCAGGCCGATCCAGACACGTTTGATCTGAGAGAACTGAAGTGTAAGTTTGATGTGATTCTGATAGAGCCTCCACTGGAGGAGTATTACAGAGAGTCGGGCATCATTGCCAACGAGCGCTTCTGGACCTGGGACGATATCATGAAGTTGAACATAGAGGAAATCTCATCTATTCGCTCTTTTGTATTCCTGTGGTGTGGTTCAGGAGAAGGCCTTGATCTCGGCCGAATGTGTCTGAGAAAGTGGGGCTTCAGGCGATGTGAAGACATTTGTTGGATCAAGACCAACAAAAACAATCCTGGCAAGACTAAAACGCTGGACCCTAAGGCAGTGTTCCAGAGAACTAAGGAGCACTGTTTAATGGGTATCAAAGGCACAGTTAGACGCAGCACAGATGGAGATTTCATTCACGCTAATGTGGATATAGACCTGATCATTACAGAGGAGCCGGAGATGGGCAACATTGAGAAGCCAGTGGAGATTTTCCACATCATTGAACATTTCTGCTTGGGCCGTCGACGACTGCACCTGTTTGGCAGGGACAGCACTATCAGGCCAGgtTGGCTGACTGTGGGCCCCACGCTGACCAATAGCAACTTTAATGTAGAAGCTTACGCCGCCCACTTCAGTGAACCCAACTCTTACTTGTCTGGTTGTACTGAAGAAATCGAGAGACTCCGTCCCAAATCCCCCCCTCCTAAATCCATGGCGGAGAGAGGTGGGGGTGCGCCACGTGGAGGACGAGGTGGTCCTGCTGTGGGAAGAGGAGATCGGGGTCGGGAGAGAAATCGTCCAAACTTCCGTGGAGATCGAGGTGGATTCAGAGGCCGTGGAGGCCCACATCGTGGATTCCCTCCCCGGTGATGCTGCACAACATGGCGACTTTGAGACTGAAAGCAGGAAACGTGATGTGTCTGTTAGTTTCGTACCCGTTGTTGCTCTCAGTAGGAATCATTAGTTTTGTTAGTTTAAGAGCGGGAACACTTTTTTGGGCCATACAGACTTAAATCTGAATTACTTGTTGCAATGCAAAACAATTACGAGTCACATGcgaaatatttgtaaaaattttaatcacTCAATTTAaccttgtttttttatataaatatttgtaataatta

Function

GO:

id name namespace
GO:0080009 mRNA methylation biological_process
GO:0005634 nucleus cellular_component
GO:0016422 mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity molecular_function

KEGG:

id description
K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3914 lncRNA downstream 13110 11849622 ~ 11910010 (-) False G2690
TU3915 lncRNA downstream 13110 11855220 ~ 11910010 (-) True G2690
TU3892 lncRNA downstream 127127 11793815 ~ 11795993 (-) True LOC122328967
TU3979 lncRNA upstream 729 11927551 ~ 11928996 (-) True G2742
TU3989 lncRNA upstream 171088 12097910 ~ 12098284 (-) False ugt8
TU3987 lncRNA upstream 216084 12142906 ~ 12150716 (-) True G2750
TU4090 lncRNA upstream 363007 12289829 ~ 12290106 (-) True G2826
TU4096 lncRNA upstream 408530 12335352 ~ 12336759 (-) True G2829
XM_043247864.1 mRNA downstream 4913 11910750 ~ 11918207 (-) True LOC122351032
XM_043249937.1 mRNA downstream 72465 11847007 ~ 11850655 (-) True grhprb
XM_043236331.1 mRNA downstream 104248 11816476 ~ 11818872 (-) True tma16
XM_043225008.1 mRNA downstream 134454 11783635 ~ 11788666 (-) True apela
XM_043247889.1 mRNA downstream 193856 11725127 ~ 11729264 (-) True polr1e
XM_043250940.1 mRNA upstream 33548 11960370 ~ 12094894 (-) True ndst3
XM_043240943.1 mRNA upstream 171107 12097929 ~ 12117383 (-) True ugt8
XM_043249903.1 mRNA upstream 235015 12161837 ~ 12195683 (-) True tll1
XM_043236922.1 mRNA upstream 284614 12211436 ~ 12225082 (-) True cpe
XM_043246632.1 mRNA upstream 309383 12236205 ~ 12246905 (-) True klhl2
TU3761 other downstream 410287 11510439 ~ 11512833 (-) True G2584
unassigned_transcript_5 other downstream 424762 11498285 ~ 11498358 (-) True trnai-aau
TU3498 other downstream 869179 11053154 ~ 11053941 (-) True G2401
TU3478 other downstream 941754 10953875 ~ 10981366 (-) True G2382
XR_006251247.1 other downstream 1109045 10810310 ~ 10814075 (-) False LOC122347618
XR_006250806.1 other upstream 414913 12341735 ~ 12365995 (-) False gria2a
XR_006250810.1 other upstream 416627 12343449 ~ 12365995 (-) False gria2a
XR_006251305.1 other upstream 977377 12904199 ~ 12926482 (-) False prom1b
XR_006251304.1 other upstream 977377 12904199 ~ 12926482 (-) True prom1b
TU4379 other upstream 1227664 13154486 ~ 13159246 (-) False smim14

Expression Profile