RNA id: XM_043237501.1


Basic Information

Item Value
RNA id XM_043237501.1
length 2556
RNA type mRNA
GC content 0.49
exon number 16
gene id glb1
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31595831 ~ 31602441 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCCAGAGAATGATTCGTTCAGTAGTCGTACATCtctagtaaaaaacaaaacaatggcaTTTCACTTCCGGACCGCTCGAACACCATGGCACCCGGTGTCGGACTGATACCGGTCCTCCTCCTGACCCTGCCATTGGTCACGTATGCCACGGCACCCAGTTTCTCTATCGATTACCATCGAAACTCCTTCATTAAAGATGGAGAGCCGTTCCGCTACATCTCCGGCAGCATCCACTACAGCAGGATCCCCAGTGTCTATTGGAAGGACAGGCTGCTCAAGATGTACATGGCCGGTTTGAACGCCATCCAGACATATGTGCCATGGAGCTTCCACGAGACGGTGCCTGGTCGGTACGACTTCAGCGGAGACCGGGATCTGGGGCACTTCCTACAGCTGTGCCGTGAAATCGGTCTGCTGGTCATCATGAGACCGGGCCCCTACATCTGTGCGGAGTGGGATATGGGGGGTTTGCCTTCCTGGCtgttgaaaaagaaagatattcTGCTGCGATCATCTGATCCAGACTATCTCGCAGCAGTGGATAAGTGGATGGGGCAGCTGTTGCCCATCTTGAAGCGTAACCTTTACCAGAACGGAGGACCCATCATTACAGTGCAAGTAGAGAATGAATACGGTAGTTACTTTGCCTGTGACTTTAATTACATCCGGCATCTCAGCCTGCTGTTTCGGGCTCATCTGGGAGATGATGTGGTCCTGTTCACCACAGATGGACCGACTGTGGGTTATCTCAAGTGTGGATCTCTCCAGGGCATCTATGCCACCGTTGACTTTGGTCCAGGGTCAAATGTAACCGCTGCGTTTGAAGCACAGAGACACGCAGAGCCACGTGGGCCTTTGGTCAACTCTGAGTTCTACACAGGCTGGTTGGATCACTGGGGCGAGAAACACTCGGTGGTTTCCACAGCTGCTGTGGTCAAGACCCTCAATGAAATTCTGGCAGTGGGAGCCAGCGTCAACTTATATATGTTCATCGGTGGAACTACCTTTGGTTATTGGAATGGCGCCAACACTCCTTATAGTCCTCAGCCGACCAGCTATGACTTTGACGCCCCGCTTACAGAAGCTGGAGACCTCACAGAAAAGTATTTCGCTATAAGAGAAGTCATCAAAATGtacaaagAGATACCAGGGGGACTGCTGCCTCCATCAACACCTAAATTTGCTTATGGGCAAGTGCAGATGAAGAAGCTCAAGACCGTGTCAGAGCTTTTAGATATATTATCTCTCTCCGGCCCCGTCAAAACTCTTTACCCAATAACGTTTACTGATATGAACCAGGCGTTTGGCTTCATGCTGTATCAGACTGTTTTACCTGTCAACTGCTTGAAACCCACGCCGCTGTCGTCCCCGCTAAACGGAGTCCACGATCGGGCCTACATATCGATCGATGGGatTGCTGCTGGTATTTTGGAGAGGAACAAGGCACTCACCATTAATATAACAGGGAAAGCCGGCAGCCACGTGGACGTCCTGGTGGAGAACATGGGGACAATCAACTATGGCAAAGAAATTAATGACTTCAAGGGCCTGGTGTTTAATCTGACTCTGGGTGCTGATGTTCTGGGTAACTGGACGGTGTACTCTCTGAGTATAGATGAAGCAGTGCGCAAGGGCCTGTTGTCGGCTTCGACCAGATTCGTCTCCACCTCCGCCAGCCCCACTCCTCCTGCCCTTTCACCTCCGACCTTCTACGCCGGCAGCTTCATCATCCCCGACAGCATCCCTGACCTCCCTCAGGACACATACATCCAGTTTCCCAACTGGAGGAAGGGTCAGGTGTGGATTAACGGTTTTAACGTGGGTCGCTACTGGCCGTCCCGGGGGCCACAGATAACCCTCTTTGTCCCAGCACACCTGCTCAGCACCTCGGCCCAAAACAACGTAACCGTTCTGGAGTTGGAGGCGGCCCCTTGCTCCTCGGGGTCCTGCATCGTGGAGTTCACCGACACTCCTGTCATAAACGGCTCCGTGAAGTCAACCGGACACTACAAGGAAATTTCATCGGACGAGACCTTCTGGAGCAGAACCATCTTAGAATAAACCGTTCACATCACACATTTTACTGATTTGAAGGAGTCTAAAGGATGAAGTAGTAAGATATGCCACGCGAGAGTACTGTATTGAAAATATGATAATCACTGTGAATCTACAGTAATGTGTGGCACATGTACAGTAATGTACTGTATAGTGATTCTCAGGTGTCAAAGCTGCTCAGAATGAGCTTTGGTCTTGCACTAGATGCCTTCACGATGATGTTACCATTGATTTTCTACTGCTGATTTTAAGCCGTTGCACTTTTAACTCTCTTAAATAGTACTAGAAATCATGTTTCGTcaagtgctctttttttttttttttttttttgcaaatgagtGACTTTTTGGTTTTTGCACCGCATGTCCTTttgttaatatgaaataatggttaatgtttttgtatctGTCCACTTGCATATCTTTTAATTGTGCAGTTAAAGCCATATGAAATCCAGGAATCGTTTGCAAAATAAACTGCACTGTTTTTTACATTCTTCA

Function

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004565 beta-galactosidase activity molecular_function

KEGG:

id description
K12309 GLB1, ELNR1; beta-galactosidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12089 lncRNA downstream 6041 31580738 ~ 31589790 (-) True G8101
TU12088 lncRNA downstream 15675 31579930 ~ 31580156 (-) True G8100
TU12081 lncRNA downstream 47077 31548195 ~ 31548754 (-) True G8093
TU12055 lncRNA downstream 99921 31492297 ~ 31495910 (-) True G8074
TU12069 lncRNA downstream 115487 31479187 ~ 31480344 (-) True G8084
TU12110 lncRNA upstream 20233 31622674 ~ 31625823 (-) False LOC122349741
TU12116 lncRNA upstream 20233 31622674 ~ 31625823 (-) False LOC122349741
TU12118 lncRNA upstream 20233 31622674 ~ 31626415 (-) False LOC122349741
TU12105 lncRNA upstream 23490 31625931 ~ 31626415 (-) False LOC122349741
TU12106 lncRNA upstream 23490 31625931 ~ 31626415 (-) False LOC122349741
XM_043236147.1 mRNA downstream 536 31591137 ~ 31595295 (-) True cldnd1b
XM_043236111.1 mRNA downstream 23210 31561981 ~ 31572621 (-) True tacr3l
XM_043245858.1 mRNA downstream 202745 31384340 ~ 31393086 (-) True LOC122349710
XM_043245847.1 mRNA downstream 217292 31372496 ~ 31378539 (-) True LOC122349700
XM_043236591.1 mRNA downstream 621670 30972789 ~ 30974161 (-) True cldng
XM_043245889.1 mRNA upstream 20432 31622873 ~ 31626684 (-) True LOC122349741
XM_043245898.1 mRNA upstream 24462 31626903 ~ 31630020 (-) True LOC122349752
XM_043223784.1 mRNA upstream 31960 31634401 ~ 31661603 (-) True LOC122327810
XM_043233764.1 mRNA upstream 125647 31728088 ~ 31734933 (-) True best2
XM_043233726.1 mRNA upstream 137344 31739785 ~ 31745699 (-) True get3
TU12077 other downstream 41796 31550186 ~ 31554035 (-) True G8089
TU12079 other downstream 58415 31532069 ~ 31537416 (-) True G8091
TU11966 other downstream 638345 30946089 ~ 30957486 (-) False G8009
unassigned_transcript_184 other downstream 732870 30862870 ~ 30862961 (-) True trnar-ucu_5
TU11729 other downstream 965326 30630234 ~ 30630505 (-) True G7868
TU12112 other upstream 20233 31622674 ~ 31625823 (-) False LOC122349741
TU12119 other upstream 20233 31622674 ~ 31626415 (-) False LOC122349741
TU12124 other upstream 24529 31626970 ~ 31629972 (-) False LOC122349752

Expression Profile