RNA id: XM_043238130.1


Basic Information

Item Value
RNA id XM_043238130.1
length 582
RNA type mRNA
GC content 0.53
exon number 3
gene id ndufb7
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27066158 ~ 27067828 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGACCGGAAGCCAGAGTGGGTTTCTGGAGGTGACCGATTGACAGCGCCTAgaattgttttgatttcttagTTATACGCGACATTATTGTTGTCAGCGGTTAAACAGCTTTTGCGGTCAGGGGTTGATCTTCCGCGTGCAAGAATGGGGTTGCATCTCGTGCGGAGTTACGTCACGGAAAGGGACACGACGCCGGACCCGAATAAGCCGCCTTCGCACGACCCTCATCTGGGCTTCCCTGATCGCAAAGAGAGAGAAATGGTGGCGACGCAGGAGCAGATGAACCTGGCCATGCTGCCGCTGGAGCAGAGGGACTACTGCGCGCACTACCTGCTCCGCTTCCTCAAGTGCAAGAGGGACAACTTCCCCAACTTCCTGGCCTGCAAGCACGAGAGACACGACTGGGACTACTGCGAACACCAGGATTACGTGATGAGGATGAAAGAgtacgagagagagaggagactgAACCTGAGGAAAAAGAGGATCGAGGCCAACTCAGCCTAGCCTTCACCTCGCCGTCGCTTCCTGTGTATATAAATAGCTCTTACATTAATAAAGATGATCTTGTGAGCTCTCCAAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005739 mitochondrion cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function

KEGG:

id description
K03963 NDUFB7; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10157 lncRNA downstream 828 27064144 ~ 27065330 (-) True G6949
TU10140 lncRNA downstream 53787 27012123 ~ 27012371 (-) True G6933
TU10136 lncRNA downstream 56606 27009156 ~ 27009552 (-) True G6929
TU10134 lncRNA downstream 58171 27007503 ~ 27007987 (-) True G6927
TU10133 lncRNA downstream 59015 27006647 ~ 27007143 (-) True G6926
TU10213 lncRNA upstream 229347 27297175 ~ 27297611 (-) True G6981
TU10173 lncRNA upstream 231598 27299426 ~ 27321856 (-) True G6957
TU10214 lncRNA upstream 233978 27301806 ~ 27302275 (-) True G6982
TU10215 lncRNA upstream 235272 27303100 ~ 27305172 (-) False G6983
TU10217 lncRNA upstream 235272 27303100 ~ 27305694 (-) True G6983
XM_043238115.1 mRNA downstream 11563 27051727 ~ 27054595 (-) True dnajb1b
XM_043238097.1 mRNA downstream 41858 27014477 ~ 27024300 (-) True LOC122344082
XM_043245108.1 mRNA downstream 73576 26985359 ~ 26992582 (-) True LOC122349164
XM_043245477.1 mRNA downstream 82571 26980305 ~ 26983587 (-) True LOC122349409
XM_043224501.1 mRNA downstream 146129 26917669 ~ 26920029 (-) True si:ch211-286b5.5
XM_043238100.1 mRNA upstream 846 27068674 ~ 27076809 (-) True zgc:136908
XM_043238104.1 mRNA upstream 10671 27078499 ~ 27085950 (-) True samd1b
XM_043238109.1 mRNA upstream 19715 27087543 ~ 27097079 (-) True prkacab
XM_043238126.1 mRNA upstream 31078 27098906 ~ 27103260 (-) True asf1bb
XM_043238123.1 mRNA upstream 36061 27103889 ~ 27105348 (-) True LOC122344431
TU10045 other downstream 263233 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other downstream 263233 26802170 ~ 26802925 (-) False c1h19orf53
TU9833 other downstream 648279 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 648279 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 930672 26130788 ~ 26135486 (-) False G6592
TU10183 other upstream 130077 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 173396 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 686954 27754782 ~ 27939452 (-) False G7105
TU10420 other upstream 686954 27754782 ~ 27939452 (-) False G7105
TU10496 other upstream 1006820 28074648 ~ 28076444 (-) False LOC122349330

Expression Profile