RNA id: XM_043239904.1


Basic Information

Item Value
RNA id XM_043239904.1
length 3508
RNA type mRNA
GC content 0.39
exon number 9
gene id gyg2
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30854036 ~ 30861383 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCGTGTCGTGTCGTGTCGGGGTTGAATGACCTCTGTCGTGTGACCGTTAGGCTACTAACAGATTTCACTTGTTATTGAGCACGGACTGAGGCGCGCTGCTGTTTGGAGATATGCTATCATCGActtgccatttattttaaacgcTGCTATTTACTTAATAGCGCTCGTTTCATACAGTCTTTCTTCGTTGCTTGGAAGAGCcgtataaaaactgaaatggcGGagGCTCAGGCCTTTGTGACCCTGGCCACCACAGATGCCTACAGCATGGGATGTTTAGTAGTAGGCAAAAGTCTGCGCAGGCATGAAACATCGAGGAAGTTAGTGGCTATGGTTTCCCCCGGCGTTTCCAGAGCATCGAGATCGGCCCTGGAGGACGTGTTTGATGAAGTCGTGGAGGTAGATGCGCTGGACAGCAGAGACAAGGCCCATCTCTCCTTGCTGCGACGTCCTGAACTGGGGGTCACTTTCACCAAACTCCACTGCTGGACCCTCACACAGTACACCAAGTGCGTGTTCTTGGATGCAGACACGCTCGTACTGTGTAATGTCGATGAGCTGTTTGAATATGAAGAGTTGTCTGCTGCACCTGATCCAGGCTGGCCGGATTGCTTCAACTCCGGGGTATTTGTGTTTAGGCCCTCCCTGGATACCCATACCCAAATACTGGAACACGCTGCACAGCACGGCAGCTTTGATGGAGGAGACCAGGGTGTTTTAAACACGTTCTTCAGTGACTGGGCAGTAAAAGATATCAGGAAGCATTTACCATTCGTGTACAACCTCACAGCCGGTGTCGTTTACACGTATCTACCAGCATTTCAGCAGTATGGCCACCATGCTAAAATCGTCCACTTCCTGGGTGGGACTAAGCCCTGGCACCTTCCATATGACCCACAGGCTTCCAGTGAGGCGTCTTTAAGAGATCCCAGCAACAACTTTCAgcaatttatgaatttatggTGGGTGGAGTACTACAGTCAAAGACGGCTACAAGTTCAGAAGGACGACAAGAATGAAGACTATTCAGCGCAGCGGTTGGTTTCTCCACAGACACATCAGACTCCATCACAAAGCCAAAAGAGCAGCACTGAAGCCCACCACAAAGAGATGACGATGCCCTCTCCACCTCTGACTTTGGACCCGCTAACAATCAGCTCTAGCTCATCCGAAAAGTCAGAGGAATCGAATATTCTCTCTGATGTTCTGTCTGGTGGGGAGACTGAGGAGACCCCTGTAGTCAGCCCTCCATCTGAGCTAGAGAGCGAGACTGCTGATGATTCTGCCACAGCCACCGGAGAAGCTGCTGCTGCTGAGACAGAGGTGGATGACCTGGAGCATCGCCGCATGTGGGAGGAAGGCCATGCTGATTACGTGGGTAAAGACGCCTTTAACAACATCATGAGAAAACTCGACCTGTTCCTTGATTAATTTTGTGAGTATGTGCTGGATGTGTGTTCATTAGGTTATATAAAACACTGCATCTATACACTTTCATTTGTACTGTACATATCAACGATCCCAACTGTTACGTTTTCCCCTCCTCAAATATAGCTGCTTTTCTACCTCTGTTGTGCATTTGCCGAAATCACTGGATCGTATGAAAAAATACTCTACtatatatttaccatttatGTTAAATCTAGacagacatttaaatgtagtaATTCGGTTTGGGTATTTTGAACCTATATGTAATAAGTATGTGATATCTATCTGTATCATTTAAGAATTGGCTATAAATACGCTCTGTAGCTGTTAAGAGAGGCTTTGAAATTGGCTTACTGTTTCAAATCAATTATTTAAGCATTAGTCGATTACTATTAATTCACGTGAAAAGAACTGAGAgaattatttagtatttattgtCAGTGTCTGACAAAAATCATGTAGTAACAAATGCTTCAACCGAGAGGAAATGCGCCTAATGACATAAGCGGTCAAAAACATGTCTTTCTTTGCAGTGCCCTACAGCAAAATTGCCTTTTTTGCCACTAGAGGTCAGCCTATAAACACTCTCTAGTTTTAACACCTACACAAACTCCACCAGCAGAGTAGACATCTCAGTTGAAAAAAGACGATGAAATAGAATCATAAACACATATTTGTGTCTTTTCATAACCCTGTCTCCAAATCATCTGTCTCACTACTAACTTTTAGCGGTTGGACTAAGTCACAGCCAGTTCTAAGATGGAACCTTGAGTTTAAACTTAGATCCATTTATTACTCTCTGGCTCTGCCTTGTTTACATGACAGCTCTTTGAAATCATGAACTATTTATGCTTATGTCAATTAGAGAACATCTTTCACTTGATTTGGTTCAATAAATTATGCCATTCTCAGTATATTGAGGTCTTCTCTTCTgatagatctctctctctctctctcttcatatgTTCTAATCTAAGAGACTATCTAATAGAACTCTTATTctctttaaatgtgtattttgacaCGTGGACAAACCACATACGTTTATATCTATGAGCATGCTTTgactctttttaaaaattttgagATTCTGAGAGATTACTTGTGCTGTGTGTCATAGTCCggtacatacagtacataaagGGTTTCAGAGTCACAAATAAATGCGACATGCTTTATATGACCTCTTCCatgttttgtggttttgttgtCAAGTTTTTGCGttgtttcaataataataataataattctgctGTAGTTGGTTTGCGTGCAAATTTGATAGGttgcattttaacaaacatatGTCACATAGTGAGGTTTGCACAATATGTTGTTGAAAAAAATTTAGGGCTCGTCTGATTCCTTTGCTTTCAATATGTTTGAGAAAACTTTAGctacattttttcagaatttctaGTTTTAATGAACCACTTACTGATTAGAGAATGTTTATATTATCAGAGGCTagtcaaaaatcaaaaaatttacaaattttgctttatacaatatacatataataaaggcacaaatgctttatttaaagaatatacctatacatattatatatatatttatagcagaTTGTTGTGTACAATGATTGACGCCCTTTTGTTTCATCAAAATTTTATGGGACATCCACCCAAAGGTAggataatataatacataatatttgttaataaaacaagCATTGTTCCTTGTGTTCCATGTGTATCATGTGTGTATCACAATGGCTGACgtcttgactttttttattaaaacttatctttattaaaaatatgcaaatacaaatacattagtTTTCAAAGAACAAATAATTTATAAGTGGTACAACTGAAATAACAGAAAGATATGAaacatttagaaacaaaaaacaaaacaaaaaaacatgagaaaGCTATTGTAGGCAGCTTTGTATCTGATTTGATAGTAATTCTTGAAAGCTGAGAATCTGTATGTAATACTGGGGGAAAAAGTAATTTTTGGAatgtgattcattaaaaaaaaaaaaccaatgtgaatgattttaatattttttttctttacttgatgcattattaaaaataattttatccCTGA

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K00750 GYG1, GYG2; glycogenin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11933 lncRNA downstream 9866 30843717 ~ 30844170 (-) True G7989
TU11932 lncRNA downstream 10634 30842978 ~ 30843402 (-) True G7988
TU11736 lncRNA downstream 192569 30656456 ~ 30661467 (-) True G7874
TU11727 lncRNA downstream 294484 30559250 ~ 30559552 (-) True G7866
TU11725 lncRNA downstream 349347 30463323 ~ 30504689 (-) False G7864
TU11965 lncRNA upstream 58164 30919545 ~ 30944969 (-) True G8008
TU11968 lncRNA upstream 82117 30943498 ~ 30957486 (-) True G8009
TU11964 lncRNA upstream 87466 30948847 ~ 31004114 (-) True G8007
TU12006 lncRNA upstream 316413 31177794 ~ 31180161 (-) True G8042
TU12021 lncRNA upstream 342646 31204027 ~ 31297841 (-) True G8054
XM_043245788.1 mRNA downstream 429754 30401205 ~ 30424282 (-) True LOC122349663
XM_043245781.1 mRNA downstream 453405 30393908 ~ 30400631 (-) True LOC122349654
XM_043247390.1 mRNA downstream 529171 30323319 ~ 30324865 (-) True LOC122350704
XM_043246511.1 mRNA downstream 532053 30319081 ~ 30321983 (-) True LOC122350179
XM_043247807.1 mRNA downstream 539985 30307963 ~ 30314051 (-) True LOC122350995
XM_043235414.1 mRNA upstream 998 30862379 ~ 30873365 (-) False cd99
XM_043235405.1 mRNA upstream 998 30862379 ~ 30873101 (-) False cd99
XM_043235422.1 mRNA upstream 5057 30866438 ~ 30873108 (-) True cd99
XM_043235895.1 mRNA upstream 75017 30936398 ~ 30941726 (-) True creb1a
XM_043236591.1 mRNA upstream 111408 30972789 ~ 30974161 (-) True cldng
TU11729 other downstream 223531 30630234 ~ 30630505 (-) True G7868
unassigned_transcript_183 other downstream 467170 30386795 ~ 30386866 (-) True trnap-ugg_2
unassigned_transcript_182 other downstream 468595 30385369 ~ 30385441 (-) True trnap-ugg_1
unassigned_transcript_181 other downstream 469235 30384731 ~ 30384801 (-) True trnae-uuc
unassigned_transcript_180 other downstream 472843 30381121 ~ 30381193 (-) True trnar-ucg_114
unassigned_transcript_184 other upstream 1489 30862870 ~ 30862961 (-) True trnar-ucu_5
TU11966 other upstream 84708 30946089 ~ 30957486 (-) False G8009
TU12079 other upstream 670688 31532069 ~ 31537416 (-) True G8091
TU12077 other upstream 688805 31550186 ~ 31554035 (-) True G8089
TU12112 other upstream 761293 31622674 ~ 31625823 (-) False LOC122349741

Expression Profile