RNA id: XM_043243673.1


Basic Information

Item Value
RNA id XM_043243673.1
length 2845
RNA type mRNA
GC content 0.45
exon number 18
gene id melk
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12607766 ~ 12617282 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCAAACAAACGCAAAACAGCAGAAGCTAACAGCTAActcatttacatttctgttttattcaaaccgatattaaataatgttattctGTTACGGGGGGGAACTCCTTCCACCTAGCGCAAAGGACTTTTACCGTAACAGGAAACAGGAACTCTTCTGACGTAGCAAGTGggaaattcaaatttttaaaacatgttcgAACGAAAGATGCTTCggcagttttaattttatatggCATTGAAAACACAACTAATCTGTGGTAACTGAGTAAATTATCTCCTCGCTTTAaaagcatatacattttattgttttattgttttgaactCGCTCATAACGGCGTTTTAAAGTGAACCATCGGAGCACAGCTGGTGTAAGTGTCCTCAGCATGCCTGTAGAAAGCACTTCAGAACTCCTCAGGCACTATGAGGTTTATGAAACCATCGGCTCAGGCGGGTTTGCCAAAGTCAAACTTGGTAGACACATACTGACAGGAGAGAAAGTGGCCATCAAAATAATGGAGAAGAAAGACTTAGGGGATGATCTCCCCAGAGTTAAGATAGAGATCGAGGCCATGAAGAACCTCAGTCATCAACACGTGTGTCGTCTCTACCATGTTATTGAGACATCAAGCAAGATCTACATGGTGCTTGAGTACTGTCCTGGAGGAGAGCTGTTCGATTATATCATCGCTAAAGACCGGTTGTCAGAGGAAGAGACCCGGGTGTTTTTCCGTCAGATCATCTCAGCGTTGGCTTATGTTCATAGCCAAGGCTATGCCCACAGAGACCTCAAACCGGAAAACCTGTTGATCGATGAAGATCATAACCTAAAACTCATTGACTTCGGCCTTTGTGCCAAACCAAAGGGCGGTTTGGGTTTTGAATTGCTGACCTGTTGTGGCAGTCCAGCATATGCAGCTCCAGAGCTCATTCAAGGCAAGGCTTACATTGGTTCTGAGGCTGATGTGTGGAGTATGGGAGTATTGCTTTACGCTTTACTGTGTGGTTTTCTTCCGTTTGATGATGACAATTGTATGGTACTCTACAGAAAAATCACTAGAGGCAAATATAGCAACCCCCACTGGCTTTCACCTGCCAGCATTCTGCTTCTGAACCAGATGATGCAGGTGGACCCAAAGAGGCGTTTGACTGTGAAACAATTGCTTGATCACCCTTGGGTCATGAAGGGATACAGTACACCAGTGGAGTGGCACAGTAAACATCCTTTGGGTCATATAGATGAAGACTGTATCACTGAAATGGCGGTGTCTTTTAAACAGTCCAGACAAAGGTCAATCCAACTTGTGTCAGAGtggaagtACGATCAAATGACCGCCACCTACCTGTTACTGTTGGCTAAGAAGCGTCAAGGCCGCCCCGTGCGTCTGAGAGCTGAACGCCCCATGATTGACCCCATGTACTCTCCATTACAGAACATACAACTGAAGAATAGTCTACGCTTcagtgaggatgatgatggtgtTCACCCAGTGGTGCTTGGCTCTATGGTCTTCCCCCCTGATTGCTACGATGACGAGAATCCCTGGACCCCTCTCACGCCcaagaacacacacaccacaaacacTCCACGCATGAAGCTCACCTCTGACACATCGGAGAAGCGGTGGAATGAAATGGGCTACTCCCCCATCATAGAGCAACGGAGACCCCGTAAACAGAAGCCAGAGAGACGTGATAGAGCcagagaaaataaagagaatcTTGCTGTGACGGCCACAGATGGAGATGTGTTTGCTCTGCCTGCTCCCCGAACTCCGATGTCCAGCAGAAAGACCAAATCCAACAGAAATGTAGTGACAACACCTAACAACAACATCACCACCACAAGCAGTGACGCAGGCAAAGGAGCGGGCAGTGCCACTAAAGAAGCGTCCCGCAGGAGAGAAGTGGACCAACAGCAGAGCGGTCAACAAGGAGAACTGGATATGCTGGCTTTCAGCCCAGAGAGAAGGTCTCGATCTCTGGACTTGGCTGGCTGTCAGGTGGACAGTGGGCAGAAGCGGAAGGGAGGTAAAGTGTTTGGCAGTCTGGAGAGAGGCCTGGATAAAGTTATTACAATGCTCACTCCCAGTAAGAGGAGAGGACTTCGAGACGGACCACGCAAAATTAAGgCTCAATACAACGTGACCCTCACCAGTCAAACCAATGCAGACCAAGTGCTCAATCAGATTCTCAGCATCCTTCCAGAGAAGAACGTGGACTTCGTTCAGAAGGGCTATACTCTGAAGTGCCACACGCAGTCGGACTTTGGAAAGGTGACCATGCAGTTTGAGCTGGAGGTTTGTATCCTGCAGAAGCCTGAGGTGGTCGGGATCCGTCGACAGCGGCTCAAAGGTGACGCCTGGGTGTATAAACACCTGGTAGAGGACATCCTGTCCACCTCCAGCATCTGATATCATTTCATCCACTTCAAGAGTGACATCACCTCCTGCCCGCCCTGACTTTAACACGGTGGACATACATTACAGAATGCCCTACTTTATGCGCCTTATGATGATATCCATCATTTTCCGTTATGCCCAGGAGGTGGTACAGTATTATTCTGCCTTTGAGAGAAGTGCAAGTATTTTGTTGTCACTTTACTTGTAATGACCTAATTCAGCTAATTCATATAGCATTAAGCAGCAGTTGTATCTTATTTgccttttgttttcatgtttgtctCCTTGACGTCAACGTCCGtcatgttttatgtgttttaatgtcatttttaatgtaaatttaatgtaGTGTAAAGTAATATGTTACCCTTTTCTAGATGTCTGTCATGTTTGCTTTTGATAATGTCAATATgacatgtaattaaataaatattttaacaccaTGTA

Function

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0048821 erythrocyte development biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0007049 cell cycle biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0061351 neural precursor cell proliferation biological_process
GO:0005886 plasma membrane cellular_component
GO:0005938 cell cortex cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0008289 lipid binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG:

id description
K08799 MELK; maternal embryonic leucine zipper kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU4170 lncRNA downstream 12472 12592441 ~ 12595294 (-) True G2889
TU4163 lncRNA downstream 57527 12549922 ~ 12550239 (-) True G2882
TU4117 lncRNA downstream 152194 12455354 ~ 12455572 (-) True G2842
TU4116 lncRNA downstream 152997 12454231 ~ 12454769 (-) True G2841
XR_006251338.1 lncRNA downstream 163883 12442491 ~ 12443883 (-) True LOC122348535
TU4173 lncRNA upstream 486 12617768 ~ 12618042 (-) True G2891
TU4338 lncRNA upstream 269494 12886776 ~ 12887653 (-) True G3020
TU4359 lncRNA upstream 351811 12969093 ~ 12973012 (-) True smim18
TU4410 lncRNA upstream 588505 13205787 ~ 13206826 (-) True G3070
TU4414 lncRNA upstream 677415 13294697 ~ 13295015 (-) True G3074
XM_043243721.1 mRNA downstream 63625 12499771 ~ 12544141 (-) True zcchc7
XM_043236997.1 mRNA downstream 113441 12477518 ~ 12494325 (-) True adamtsl7
XM_043236985.1 mRNA downstream 167321 12437822 ~ 12440445 (-) True LOC122342847
XM_043236977.1 mRNA downstream 172868 12429730 ~ 12434898 (-) True LOC122342838
XM_043243043.1 mRNA downstream 188486 12407369 ~ 12419280 (-) True ncapd3
XM_043243455.1 mRNA upstream 1201 12618483 ~ 12643576 (-) False LOC122348170
XM_043243446.1 mRNA upstream 1201 12618483 ~ 12643576 (-) True LOC122348170
XM_043243742.1 mRNA upstream 107292 12724574 ~ 12772830 (-) True chrna8
XM_043243753.1 mRNA upstream 107292 12724574 ~ 12751291 (-) False chrna8
XM_043243793.1 mRNA upstream 161307 12778589 ~ 12794404 (-) False chrnb3a
XR_006250806.1 other downstream 241771 12341735 ~ 12365995 (-) False gria2a
XR_006250810.1 other downstream 241771 12343449 ~ 12365995 (-) False gria2a
TU3761 other downstream 1094933 11510439 ~ 11512833 (-) True G2584
unassigned_transcript_5 other downstream 1109408 11498285 ~ 11498358 (-) True trnai-aau
TU3498 other downstream 1553825 11053154 ~ 11053941 (-) True G2401
XR_006251305.1 other upstream 286917 12904199 ~ 12926482 (-) False prom1b
XR_006251304.1 other upstream 286917 12904199 ~ 12926482 (-) True prom1b
TU4379 other upstream 537204 13154486 ~ 13159246 (-) False smim14
unassigned_transcript_6 other upstream 601112 13218394 ~ 13218468 (-) True trnar-ucg
unassigned_transcript_7 other upstream 602014 13219296 ~ 13219368 (-) True trnar-ucg_1

Expression Profile