RNA id: XM_043243910.1


Basic Information

Item Value
RNA id XM_043243910.1
length 1908
RNA type mRNA
GC content 0.43
exon number 13
gene id anxa5b
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12881119 ~ 12887654 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGTGGCTCTACACATAGTAGTGAAGTTTAATCCTCCTACTAGCGGAGGTCACTCCTCATTCGTGCTCTTTCGTTCAGTACTGCAGTCTTTCCTCTTCTCTCGcttcaaGCTCTTTGAAGTAGGCTTTTATTCCAAAGATgGCTGGCAGAGGCACAGTGAAGCCCCAAAGTGGATTCAATGCTAATAACGATGCTGAAGTTCTCTACAAGGCCATGAAAGGACTCGgcaCTGATGAGGATGCCATTCTCAAGCTGCTGACAGCACGCACTAATGCACAGCGCCAAGAAATCAAAGCTGCATACAAAACCCTGCATGGAAAGGATTTGGTGGATAATTTGAAGTCCGAGCTGGGTGGGAAGTTTGAGAGTCTGGTAGTGGCTCTTATGGCTCCTCCCATCATGTATGAGGTCACATGTCTGCGGGACGCTATTAAGGGTGCAGGCACGGATGAGAAAGTGTTGGTGGAGATCTTGGCATCCAGGTCACCTAATGAAGTCAACCAGATCAAAAGTTTATACAAGCGAGAGCATAACGAGGACCTGGAGGAAGATGTGACTGGTGACACTGGAGGTCATTTCAAGAGGATGCTGGTTGTTTTGCTACAAGCTAGCAGACAGCAGGGTATACAAGAAGACCTCATCCAAAGCGATGCCCAGGCTCTGTTTGCTGCAGGAGAGCAGAAGTATGGAACTGATGAAGGCCAGTTCATCACTATACTGGGAAACCGTAGTAACGCTCACCTTAGGAGAGTGTTTGAGGAGTATAGGAAGCTCTCAGGGTATGAAATAGAGGAGAGCATCCAGAGAGAGACCTCAGGAACCCTTGAAGAAGTACTGCTGGCTGTGGTAAAGTGTGCCCGCAGCGTGCCAGGCTATTTTGCTGATAGCCTTTATGGTGCCATGAAGGGGGCAGGCACCGATGACCGGACACTGATCAGGATCATGGTTTCCCGCAGTGAGGTGGACATGCTGGATATCCGTGCCGAGTTCCGCAAGAGGTTTGCTACCTCTCTGCACAAAATGATTCAGGGTGATACCTCAGGTGACTACCGTAAAGccctgctgctgctgtgtggtGGTGATGATGCATAAAGCCTGCCTCTGGGTCGGATCCCATGACTCTGTAGGACGAGGGCCTAGTCCCTTTCTGAACCCAATTCATGACAAATTACAAAAACGTGACATTCCAAATCAAAAGAAGGATCTCTTGTCCAACTGTGAAGATGCTCTGCATAGCACAGAATTACTTAAATAAGCTCAAATAAGCACTAAGCAAAATGTGGCACTCAAATTCATGAAGCACGATTTATCATAGATTTAGAGagatttagatattttagtataaacttaaaaattatGAGGCACTTTCTCTATTCCATATGCAAAGAAAACCCCTTCTCTGCTTGTCTTATGCAGTCCATCATGGGGGAAAAAGTCCCACTCTTTAAAGATGAAAACTCAAGCCTTAAGAAGTTTCTGAAAACATATAGTAAGACCAAAGAACTGTAATCAGtgaagcaatattttatatgcattcagcaatttttcatgtatttattgtttgtatatttactaACTACCTTGACATTTCAGTGTATAGCGATACATAATCGGCATCAATCACAAGTTTATTTCACTGTTGACCTCtctgcatgtgtttttaaaactagATTTGTGGAAGTTAAAGGAAAGATTCACTGTGCTTTCGGTGACGGTGGTTtggaaaaaatgacagaaagaatTACCCGTGATTGGCACATTGATGTAATCACACAAACGATAATGagctaaatgttattaatattcattaaaagttGTTACTTGTTCATTAAAAGGTGCTactgctaaaatattttaatatttcattaccataatgttcaaaataaacacTCATGAACTAAAGGCAAA

Function

GO:

id name namespace
GO:2000145 regulation of cell motility biological_process
GO:0050819 negative regulation of coagulation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K16646 ANXA5; annexin A5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU4201 lncRNA upstream 7450 12794867 ~ 12873669 (+) True G2918
XR_006251341.1 lncRNA upstream 21768 12854762 ~ 12859351 (+) True LOC122348548
TU4122 lncRNA upstream 383250 12497641 ~ 12497869 (+) True G2847
TU4082 lncRNA upstream 441011 12439732 ~ 12440108 (+) True G2821
TU4081 lncRNA upstream 443861 12426545 ~ 12437258 (+) True G2820
TU4237 lncRNA downstream 48923 12936577 ~ 12937470 (+) True G2948
TU4275 lncRNA downstream 135774 13023428 ~ 13137686 (+) False G2967
TU4276 lncRNA downstream 135774 13023428 ~ 13139236 (+) False G2967
TU4279 lncRNA downstream 135774 13023428 ~ 13137686 (+) False G2967
TU4280 lncRNA downstream 135774 13023428 ~ 13155797 (+) True G2967
XM_043244081.1 mRNA upstream 156661 12659262 ~ 12724458 (+) True dnah6
XM_043243533.1 mRNA upstream 222612 12646116 ~ 12658507 (+) False kdm4c
XM_043243561.1 mRNA upstream 222612 12647052 ~ 12658507 (+) False kdm4c
XM_043243551.1 mRNA upstream 222612 12647098 ~ 12658507 (+) False kdm4c
XM_043243544.1 mRNA upstream 224102 12644679 ~ 12657017 (+) False kdm4c
XM_043243804.1 mRNA downstream 11972 12899626 ~ 12905289 (+) True zmynd10
XM_043243814.1 mRNA downstream 11972 12899626 ~ 12905289 (+) False zmynd10
XM_043243931.1 mRNA downstream 79111 12966765 ~ 12977670 (+) True gtf2e2
XM_043243405.1 mRNA downstream 198195 13085849 ~ 13123735 (+) True si:dkey-92j12.5
XM_043243427.1 mRNA downstream 198195 13085849 ~ 13123735 (+) False si:dkey-92j12.5
TU4187 other upstream 163613 12713532 ~ 12717506 (+) False dnah6
TU4185 other upstream 190849 12686245 ~ 12690270 (+) False dnah6
XR_006251287.1 other upstream 223524 12644679 ~ 12657595 (+) False kdm4c
XR_006251292.1 other upstream 232716 12644679 ~ 12648403 (+) False kdm4c
TU3862 other upstream 1040953 11837631 ~ 11840166 (+) False LOC122350793
TU4406 other downstream 315599 13203253 ~ 13205688 (+) False rhoh
TU4563 other downstream 1226777 14114431 ~ 14118433 (+) True G3187
TU4564 other downstream 1226777 14114431 ~ 14115440 (+) False G3187
TU4698 other downstream 1592590 14480244 ~ 14481346 (+) True LOC122345399
TU4804 other downstream 1715022 14602676 ~ 14603849 (+) False lrata

Expression Profile