RNA id: XM_043244559.1


Basic Information

Item Value
RNA id XM_043244559.1
length 1607
RNA type mRNA
GC content 0.42
exon number 13
gene id serhl
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22288682 ~ 22293361 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAATTAACATTCAGCGacacagacttttattttgaaataattgaaaagtTATAGATAGGCTGTTCATTGCTCACGGTGGGCgatgtgtgtgtaaattgtgAACTTGAAGGAGCTATATTTATAGACACCCTGACGGTGTTTGAACTGCACCGCAAGGCGCGAGAATGCTGCCTGCCTTCACGAGCCTCAGACACTTCGCCACAAACACGATGAGGAGAGCAGCGTCTGAGTTCAGAATGACCGTCCCGTGGGGAGAGATGAGAGGTCAGGTTTGGGGTCCTTCTAATGGTCGTCCCGTGCTGTGCTTGCACGGTTGGTCTGACAACAGCGGGACTTTCAATAATCTGATCCCGCTGCTTCCTAAAGACTGCAGATTTGTAGCCATTGACTTTCCAGGTCATGGTTTCTCATCTCATAGGCCCGATGGATGCTTTTACACCTTCCCTTTGTACGTGGCAGATGTGCGACGAGTTGTAGAAGCTCTTCAGTGGAAGCGATTCTCTATCATTGGACATAGTATGGGTGGGAATGTGGCAGGAATGTTTACTGCTTTGTACCCAGAGATGGTTGATGCCATAGTTCTCCTGGATACTTATGGATTCCTCCCAACACAAGtgACGGACATGTATGAGAACATGAGGAAAGGGATAAATGATCAACTTCAATACGACAACAAGACGGAGGATAGGAAAGAGAGGGTCTACACGTATGAGAAAGCCAAAGAAAGGTTGAAGACTGCAAACCCCTTTCTCTCCGATCAGTCTGCAGTGATTCTGTTAGAGCGGGCGGTCAGAGAAGTCGAGGGAGGATTTGTATTTACCAGAGATATGAGAATTAACCTGaaaaacattgtGAGTAATAGTATGGAGCTGTGCCTCCACATGCTGTCACTAGTTGAAGCCCCAGTGATGATAGTGCTGGCAAACGACGGcctgtacaaaatatttattctgcCCGATGGATATATTGATACGATTCGGAAAGGCTGGACTGATCAAAATGCCACCATTGTTGATGTAGAAGGGGATCATCATATTCACCTGAACAAACCTGAGGCCGTGGCCTCCGTAATCACTGATTTTCTTCAGTCACACGGCCCTGACAATAACCAGTCTTCCAAATTATAGCACACACatgctaatttaaataatgaaaaggcCTATACTGAGTCATAATATTCATACCGTTGACCGCttctttttactgtaatgctttaagcatcacaaacctatttctttctctttttttcagtttaaaataggtgttttatttgaaaacgtTCAGAACAATTTGAGAATTTTGCACTGTCCGTTTGCCTTCCGTTTTTAAGAAGAAATTAAGTCCGTGCTGATGGAAATCTCGTTCACACCTCATAGTAGGTATGGTGCTTCTGTTATATTGGCAAAATACAAATGCTGCTGCTGACAAACACTGACCGAGGTTAGTGCTGAATCACTTTATGCATTACCGGATTTAAAAGAAGCCGCCTATATGTGATGCACATAcaagttttttaaaaacgtgttaTTAAGTATTAACTAAAACATGtgttaatttttacttttgttttgatgaagcaaaactaaacattaaagtgtaaaattaaa

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7670 lncRNA downstream 1549 22285160 ~ 22287133 (-) False LOC122348696
TU7671 lncRNA downstream 1549 22285218 ~ 22287133 (-) False LOC122348696
TU7636 lncRNA downstream 244545 22043902 ~ 22044137 (-) True G5327
TU7183 lncRNA downstream 668101 21612918 ~ 21620581 (-) True G5047
TU7205 lncRNA downstream 737447 21550352 ~ 21551235 (-) False si:dkey-37g12.1
TU7696 lncRNA upstream 55153 22348514 ~ 22382972 (-) False G5366
TU7704 lncRNA upstream 55153 22348514 ~ 22382972 (-) True G5366
TU7709 lncRNA upstream 119101 22412462 ~ 22413930 (-) False G5368
TU7712 lncRNA upstream 119101 22412462 ~ 22414007 (-) True G5368
TU7752 lncRNA upstream 141252 22434613 ~ 22438354 (-) True G5395
XM_043244473.1 mRNA downstream 1161 22273986 ~ 22287521 (-) True LOC122348696
XM_043244464.1 mRNA downstream 3733 22272818 ~ 22284949 (-) False LOC122348696
XM_043244489.1 mRNA downstream 6628 22272818 ~ 22282054 (-) False LOC122348696
XM_043244482.1 mRNA downstream 7744 22272818 ~ 22280938 (-) False LOC122348696
XM_043244514.1 mRNA downstream 17948 22240381 ~ 22270734 (-) True LOC122348711
XM_043244839.1 mRNA upstream 39613 22332974 ~ 22336292 (-) True c1h19orf67
XM_043234708.1 mRNA upstream 92152 22385513 ~ 22411664 (-) True pnpla6
XM_043234725.1 mRNA upstream 92152 22385513 ~ 22411587 (-) False pnpla6
XM_043234703.1 mRNA upstream 92152 22385513 ~ 22411585 (-) False pnpla6
XM_043234715.1 mRNA upstream 92152 22385513 ~ 22411549 (-) False pnpla6
unassigned_transcript_106 other downstream 404492 21884118 ~ 21884190 (-) True trnat-ugu
TU7268 other downstream 492244 21774634 ~ 21796438 (-) False LOC122348907
TU7269 other downstream 515920 21724387 ~ 21772762 (-) True G5108
TU7263 other downstream 522398 21720060 ~ 21766284 (-) True G5104
TU7773 other upstream 246323 22539684 ~ 22550950 (-) False atp11a
TU7878 other upstream 620539 22913900 ~ 22916405 (-) True G5468
XR_006251794.1 other upstream 1479262 23772623 ~ 23916448 (-) False LOC122351696
XR_006251793.1 other upstream 1479262 23772623 ~ 23916446 (-) False LOC122351696
TU8134 other upstream 1739502 24032863 ~ 24034499 (-) False G5624

Expression Profile