RNA id: XM_043245309.1



Basic Information


Item Value
RNA id XM_043245309.1
length 639
RNA type mRNA
GC content 0.44
exon number 5
gene id LOC122349314
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28045169 ~ 28046911 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTCTGGTGAAAAGGGTATCCGTGGGAATGGCTCATCGTCTTCTTCTGATCTGTTTGCTCATGATTTACAAGGTTTCTAGTAAAGATTATTGGAATGTGAATTACAGTCTTTCACACATGTGTGCACTCAAGAACTCATCTGTGAtaataaactgtaattataCATACCCTGATGGACACCAAATCATGAAAGTGTTCTGGACCAAAGGACCAGTACGGGATGTAGAACCTCCAGATCTGTCTGAGGACCCTGAATACAGTCAGAGGCTTCAGTATCTGGGAGATAAACAGAAGAACTGCACCATGAGACTGAGTCATGTGACAAAGAAAGATGAACACAAGTACTATTTCAGATTCATCACTGATAAACCTGGTGGAAAATACACTGGTCGTTCAGGAGTGACTCTTACTGTGACAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATGTAGCTGTGCAACACACTTACATCTCTCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10488 lncRNA downstream 34922 27843678 ~ 28010247 (-) True G7138
TU10453 lncRNA downstream 43690 27960574 ~ 28001479 (-) False G7125
TU10461 lncRNA downstream 72959 27790801 ~ 27972210 (-) True G7128
TU10456 lncRNA downstream 73670 27924414 ~ 27971499 (-) True G7127
TU10524 lncRNA downstream 80535 27961915 ~ 27964634 (-) True G7157
TU10548 lncRNA upstream 27006 28073917 ~ 28074306 (-) False LOC122349330
TU10557 lncRNA upstream 62771 28109682 ~ 28114927 (-) True G7182
TU10636 lncRNA upstream 175345 28222256 ~ 28223230 (-) False nxnl1
TU10641 lncRNA upstream 191945 28238856 ~ 28239695 (-) True G7238
TU11036 lncRNA upstream 217486 28264397 ~ 28285334 (-) True G7480
XM_043250448.1 mRNA downstream 10851 28028150 ~ 28034318 (-) True LOC122352793
XM_043250458.1 mRNA downstream 10856 28028150 ~ 28034313 (-) False LOC122352793
XM_043245297.1 mRNA downstream 18352 27999354 ~ 28026817 (-) True LOC122349305
XM_043250640.1 mRNA downstream 47527 27996411 ~ 27997642 (-) True LOC122352890
XM_043250423.1 mRNA downstream 58954 27978678 ~ 27986215 (-) True LOC122352779
XM_043245320.1 mRNA upstream 3174 28050085 ~ 28052500 (-) True LOC122349325
XM_043250471.1 mRNA upstream 10195 28057106 ~ 28062090 (-) True LOC122352802
XM_043245336.1 mRNA upstream 19136 28066047 ~ 28076645 (-) True LOC122349330
XM_043242481.1 mRNA upstream 139812 28186723 ~ 28187938 (-) True LOC122347290
XM_043242487.1 mRNA upstream 144795 28191706 ~ 28192763 (-) True LOC122347302
TU10417 other downstream 105717 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 105717 27754782 ~ 27939452 (-) False G7105
XR_006250838.1 other downstream 790102 27241224 ~ 27255067 (-) False LOC122343833
TU10183 other downstream 842602 27197905 ~ 27202567 (-) False LOC122344379
TU10046 other downstream 1242244 26802170 ~ 26802925 (-) False c1h19orf53
TU10496 other upstream 27737 28074648 ~ 28076444 (-) False LOC122349330
TU11020 other upstream 197217 28244128 ~ 28248523 (-) True G7475
TU11081 other upstream 344128 28391039 ~ 28392053 (-) True G7508
TU11094 other upstream 359271 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 476794 28523705 ~ 28525551 (-) True G7527

Expression Profile