RNA id: XM_043246382.1


Basic Information

Item Value
RNA id XM_043246382.1
length 990
RNA type mRNA
GC content 0.49
exon number 10
gene id frg1
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 9893021 ~ 9898355 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACCGTACACTCACACACTGTTGCAGGAAGTCGCTTTTCAGAACGAGAACGTACGATATCGCGCAAAAACGTTTCGATTCAGCCGCTTTAACCGTGTGCGCGATCATGACGGAGTACGCACACGTAAAGTCCACCAAACTGGTCCTGAAAGGATTAAACGATAAAAGgaagaagaaaaagaacaaagacaAGAAGAGAAAACGAGATGGTGATGAAGACAAGCCGGATGTCGTTGGGGGATGGTGGTCAGCTAAAAGTTTTGGTGAGATCACAGGATCAGTGGCCATTGAGATGCACAAAAGCTCCTACGTTCATGCACTGGACACTGGACTCTTCACCGTAGGAGCTCCACATAAAGAGGATGAAGGCCCAGATCCTCCAGAACAATTTACCGCCATCAGACTCTCGGACTCCAGGATAGCTCTAAAGTCAGGCTATGGGAAGTATTTAGGTATAAGCTCAGAAGGTGTTGTGGTTGGTCGCTCGGATGCCATTGGCTCCAGAGAGCAGTGGGAACCAGTGTTTCAGGATGGTAAACTGGCCCTGCTTGCTGCAAACAGTTGTTTTATCTCATACAGCGAGAGCGGCGACATAGTGGCCAAGAACAAGACCGCTGGAGAGGAGGAGATGATCAAGATCCGTTCATCCACAGAAAGGGAGGTGAAGAGAAAAGACGATATAGCAGATGAAGACAGGGGTGATGTCAAGAACTGCGAGGTCAACTATGTGAAGAAGTTCCAGAGTTTCCAGGATCGGAAGCTGAGGGTGAATGAGGAAGACAGCAGTTCACTAAAAAAAGCCAGAACAGATGGAAAATTCCACGAGGAACTGCTGGATCGgaGAGCCAAGATGAAAGCTGACAGATACTGCAAGTGAATCCAGAactCAATGTTTAGGTGAGTAACTCCCCCAGTGTCTCGTGGGTTTGCGCAGATCACGAACCGTCACGAGAGCCACCGGCACTTCCGCCTTCACAGACTCTTCAGAGGA

Function

GO: NA

KEGG:

id description
K13122 FRG1; protein FRG1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3145 lncRNA downstream 100554 9787314 ~ 9792467 (-) True G2174
TU3099 lncRNA downstream 199583 9679896 ~ 9693438 (-) True G2138
TU2963 lncRNA downstream 878392 8708219 ~ 9014629 (-) True G2038
TU2954 lncRNA downstream 887661 8700429 ~ 9005360 (-) True G2034
TU3305 lncRNA upstream 358295 10256650 ~ 10256887 (-) True G2286
TU3313 lncRNA upstream 408615 10306970 ~ 10307238 (-) True G2292
TU3314 lncRNA upstream 409149 10307504 ~ 10307715 (-) True G2293
TU3333 lncRNA upstream 458826 10357181 ~ 10401686 (-) False G2302
TU3330 lncRNA upstream 500959 10399314 ~ 10401686 (-) False G2302
XM_043241137.1 mRNA downstream 71920 9806314 ~ 9821101 (-) True mtmr7b
XM_043241148.1 mRNA downstream 71920 9808510 ~ 9821101 (-) False mtmr7b
XM_043233514.1 mRNA downstream 123926 9766547 ~ 9769095 (-) True fgf20a
XM_043242763.1 mRNA downstream 262463 9407160 ~ 9630558 (-) True LOC122347442
XM_043235931.1 mRNA downstream 602912 9267535 ~ 9290109 (-) False dlc1
XM_043243049.1 mRNA upstream 443473 10341828 ~ 10361688 (-) False acsl1a
XM_043243048.1 mRNA upstream 443473 10341828 ~ 10355474 (-) True acsl1a
XM_043243047.1 mRNA upstream 443473 10341828 ~ 10355473 (-) False acsl1a
XM_043243046.1 mRNA upstream 474569 10372924 ~ 10398831 (-) False si:ch211-197n1.2
XM_043243045.1 mRNA upstream 474569 10372924 ~ 10398831 (-) False si:ch211-197n1.2
TU2978 other downstream 1094666 8795071 ~ 8798355 (-) False LOC122351550
TU2970 other downstream 1110434 8779218 ~ 8782587 (-) False LOC122351550
TU2800 other downstream 1285226 8603300 ~ 8607795 (-) True G1926
XR_006250550.1 other downstream 2597342 7218986 ~ 7295679 (-) False dmd
XR_006250549.1 other downstream 2597388 7205584 ~ 7295633 (-) False dmd
TU3335 other upstream 500832 10399187 ~ 10401686 (-) True G2302
TU3397 other upstream 843567 10741922 ~ 10745896 (-) False LOC122347930
TU3398 other upstream 859216 10757571 ~ 10760491 (-) False LOC122347930
XR_006251247.1 other upstream 911955 10810310 ~ 10814075 (-) False LOC122347618
TU3478 other upstream 1055520 10953875 ~ 10981366 (-) True G2382

Expression Profile