RNA id: XM_043246834.1


Basic Information

Item Value
RNA id XM_043246834.1
length 4409
RNA type mRNA
GC content 0.48
exon number 11
gene id slc25a23a
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26787308 ~ 26798014 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCCTCAGGAAGTGACTTCATAAGCCGTGCAGCCTGAATCAAAATAACCGGTCACCCCTGCGAGGAGAATATCGTGTTCGTTTTGCGTGACAGAAGACGGTCACTGAGGGCCGATCTTATCTGTGTGCGTGCGTTTATCTGCAGAGTCACTGGAGAAGTGACCGCTTTCTCGATTTAAGGCGCTCTCTCTGCTCGGGACCGGGATATTTAGGGTCATATGTCGGCAGAAGGAAGCCCCTCCTGAGGGTGTAATCCGAAGCCACTGTTACATCGCCGCAGTCCTCGGGTTTCACACATGTTTTGACGCACAAGGACAGCGCGGCGCTTCATCTCGCCTTAAAATGTCGCAATGCCCGCGGACAAGAAACGGCTAGCGCGCGGCTCTCTTGGAAAAGTGCACCGTTCGCGCTCGCGCACGCTTCCTGGTTCGCGTGCGGAGCAGCTGCTCGACGCCGACTCTCGGGACGCGGCGCGGGGGTTTGTTTGTGCTCCTTTTCTGGACGCGTCTTCCGCCCGATGCGTCTCCGGGACTGACCGCGCGCGGGGAGCGTCATGTGGCGGGCGCGGTGCCAGGACAGCGGGGTCGAACCCGAGCGCGAGCGGCTCTGGGCCGAGCTCTTCGCGCAGCTGGATCTGAACAAGGACGGGCGGATCGACGTGAACGAGCTGCGCGTCGGACTCGCCGCGCGGGGGACGTCGTGGAGCTCGGTGGAGGAGATTGTACGAGCCGGAGATGTTAACCACGACGGTCAGCTGGATTTCGAGGAGTTCATCGAGTATCTGCGTTCACACGAGAAACGCCTTAGACTCATGTTTCGCAGCTTGGACCGAAACAATGACGgtGAACTGGACGTCGGGGAGATCCAGCAGTCGCTGCACAATCTCGGCGTGGACGTCACGCTGGAGCAGGCCGCCAAAATCCTGCAGAGCATGGATAAAGACCACTCCATGACCATCGACTGGGCCGAGTGGCGAGATCACTTCCTGTTTAACCCTCTGCACAACATGGAGGAAATCGCCCAGTACTGGAAGCACTCGGTGATGTTGGACATCGGAGAGCATTTGACGGTTCCAGACGAGTTCTCGGAGAAGGAGAAGCGGTCAGGGTTCGTGTGGCGTCAGCTGATGGCAGGAGCCGTGGCGGGGTCGGTGTCCAGGACAGGAACGGCGCCGCTCGACAGGCTCAAGGTCTTCCTGCAGGTGCACGGGCAGAGCTCTGATAAGGGTAACGTGTGGCGCGGCCTGCGGGCGATGGTGAAGGAGGGCGGCCTGACTGCTCTGTGGAGAGGAAACGGCATCAACGTGCTGAAGATCGCACCGGAGACGGCCATCAAATTCCTGGCCTATGAACAGattAAGCGCTTGATGAGAGGCAGCAAAGAGGGAGGAACTCTGAAAGTTCATGAGAGATTCGTCGCTGGATCACTGGCTGGAGCTACGGCTCAAACTGTCATATACCCCATggagGTGCTGAAGACCCGTCTCACTCTCCGTAAAACCGGACAGTATTCGAGCGTGGCAGACTGCGCCAAGCAGATCCTGCAGAAGGAGGGCGTTCGGGCGTTTTATAAAGGATACCTGCCCAACATGCTGGGCATCATCCCGTACGCCGGCATAGACCTCGCCGTCTACGAGACGCTGAAGAACTCCTGGCTGCAGCGGCACGCCGAGGGCTCGCCCGACCCGGGCGTCCTGGTGCTGGTGGGCTGCGGCACCGTGTCCAGCACCTGTGGACAGCTGGCGTCCTACCCGCTCGCCCTCATCAGGACACGCATGCAGGCGCAGGCGTCAGTGAAGGGAGCTCCTCAGCTGTCCATGTCCACTCTCTTCAGGAACATCCTGGCTCAGGAGGGTGTGGTGGGACTCTATCGAGGCATCGCTCCTAACTTCCTCAAGGTCATCCCGGCGGTCAGCATCTCCTACGTCGTCTACGAGCACATGAGGGCCCTGATATTCAGATATACAGGGTACGGCCCTCTGGATGCGGTAAAATGAACGACTGTGTGAGCATGTGCTGTACTgtactgcgtgtgtgtgtgtgcctgcgtgtgtgtgtttaaccgAGTGCGCACTACTGAACTCCGAACGGGAATGGACAATAAACTAACTTGCTCCCTTTCAACTTACAGTACAATTGAAAGTGCCTCTGCTTCGAGAAACGCGTGTGTTTTATCTGTGGTCCAGTAATATGCCTCTTTTGCCGAACCCTGTGTGCTCCGAAATCACCATGACAACCAATCCAGAGTTCTAGAATCCTCCTCTGAGGATTCCGTAACTCAGCTTGAATAGTGCGCCCAAAAAAATGAACGTACTCGCCTTCGGGCCATCTGAAGCCTGGAACACACTACACTGTTTGCCCGATTTTGCCCCAAGATGATGCTAGTTGAAGAAATTTAGGGCCAGTCTGTaactcagattttttttttttctatcagaCTTTGACTCCATCCAGTCGAAAGATTATCAGACGTGTTTGGTATTTTCAGCCAAATTTAcaacacatttgttttcatttgtcacgCATCTCCTAGCAACAAGGCGCGTGATTGTGTAATGtaatagtgtagtgtatgaagCCTAGATTTCATTTGTCATCATAAGTGTAACATCTAATGAGATTTTAAATGTTGGGCATTTTATTCCAGCCTTAAGACCTAAATGGGTTTGTTTTGTAATGGGAACATGCGCACCTGCTCACCAGtgggtcctctgcagtgaatgggtgccgtcagaaggagaGTCCATAGAAAACACATATCCATCGTTAAACTTAACCATTAAGACATTAgatttaaatatgcacagaattAGCAgcattgaaattgaaaaaagtcCAGTTGCAGTGgatttttttaagctgtttgagctctctgacggcacccattcactgcagatgcaatgctacattgatttttgggtgaactattcctttaaccgATTATAAAATCCTGCACTGCGTCCCAGTTTGCACATTATCCACACTAAATAGTGTTAGGTCTCATTcatgaaacacatttttgtgtaaattgtTCTCTCGTGACAATTTATTTACACAGTGTTTAATTGTGCTTGTGTTTCATGAACAACGCCTTcacaataatttttaattaatttcccAGTGAAGCATGCGTCCATGCATGTTTTTCTCCAGCTGATGTTGTCCCCCATCGGTGTAAGGTTTATGACGGTTTTCTTTTTGACTGTTTCAGGTAAAGAAAAGTATCGAGGGATGCGAGGCAGAAGTTGCCGCTGcagtttttaagtgtttaacaAAGGGGTTTTGAATTTAGCTAGATGCTAATGCTAACAAGCAAACTGTAGATAAGTGGAATCGATGCACACTTAATGGCCCAACACTGGCATATCATTTTACTACAAACTCTTACTCTGTACTTTGTATTTTCAGTGAGCAGTGTAGGTATCAGAATTGGGACACAGCCCGGGAGTTTATATAGCTGTTAATACATGAGGTACTGCAGCCTGTGGTTTGGAGCAGAAAGCCTTATGggggtttgtttttgtgattcttGACTCGTAGAACAGTAGCATTAAGCAAAAATACGACACTTCTAGGTCAGTGCTCTGTTTTATCGCCGACCGAGTTGATACAGTGTATGcgttacaataaaataaagattctgTGGTTTGCATAGAATTAGAGGATTATTTGTTCACAAAATTCTACGCAAGTTCAAGACTCAATTGGATTTTCGTTTCTTTTAATCTGTCCTTTAGCACTAGTAAATGTTCACAACACAAACTTTTAGCAgctatatatgcatttaaatgttagtCTTTATCTTCTGGGAAAACGGACCAAAGATATTGATGACATCATCCTGCACTCGCGGAGCGTATCCAATCAAGTGCTCTCAAGAACCACACCGTCTCTCCCACTTGGGAGACCGACACTggctatttaaatatacagttataGTTATACAGTAGTCAGCATGAGAAGTGGATCGAAACCTTACATCAAAGTTgtcttaaaatctaaaaaaaactttgattcattttttgatccacttcagatGTTgactaataatactaataatgtcATCTGAGGGCCTGATTCAAAGAACAGGTTTAGCAAAAGAGCTAGTTTGTCAGATTTTAGTGAAAATAAGTCGGACTGTGTGAAATAAGCCCGGtttatttggtaaacttgttttatgaaacaggcccCTACTTTCGATAAAAGCGAAATATTTGGCATGTTTACATGGATTCTTTCAAATTTGCCCACAATTAGTGTGAAAAACACGTTTCCTTATTTTGGTGTTAACGAAAAATCATGTATggtcattatatattttatgtacttTTCTTTGAAAGGAAACTAAAGTCTATTACTGAATGCATGTATGagaatgtaaattaaattgaattaaattaaactctTCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10053 lncRNA downstream 22828 26760004 ~ 26764480 (-) True G6870
TU10058 lncRNA downstream 29016 26754732 ~ 26758292 (-) True G6874
TU10059 lncRNA downstream 29016 26757198 ~ 26758292 (-) False G6874
TU10056 lncRNA downstream 38352 26748723 ~ 26748956 (-) True G6873
TU9983 lncRNA downstream 96818 26689354 ~ 26690490 (-) True G6834
TU10026 lncRNA upstream 11935 26809948 ~ 26865737 (-) False G6856
TU10030 lncRNA upstream 65090 26863103 ~ 26865737 (-) True G6856
TU10071 lncRNA upstream 119666 26917679 ~ 26919998 (-) False si:ch211-286b5.5
TU10072 lncRNA upstream 119666 26917679 ~ 26920034 (-) False si:ch211-286b5.5
TU10082 lncRNA upstream 135119 26933132 ~ 26942207 (-) True G6887
XM_043246813.1 mRNA downstream 408 26778467 ~ 26786900 (-) False LOC122350383
XM_043246804.1 mRNA downstream 408 26778467 ~ 26786900 (-) True LOC122350383
XM_043246905.1 mRNA downstream 13488 26767286 ~ 26773820 (-) True crtac1a
XM_043237802.1 mRNA downstream 48268 26734472 ~ 26739040 (-) True avpi1
XM_043238058.1 mRNA upstream 4167 26802180 ~ 26802954 (-) False c1h19orf53
XM_043246354.1 mRNA upstream 5395 26803408 ~ 26819171 (-) False vps54
XM_043246334.1 mRNA upstream 5395 26803408 ~ 26819171 (-) False vps54
XM_043246325.1 mRNA upstream 5395 26803408 ~ 26819171 (-) False vps54
XM_043246318.1 mRNA upstream 5395 26803408 ~ 26819171 (-) False vps54
TU9833 other downstream 369429 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 369429 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 651822 26130788 ~ 26135486 (-) False G6592
TU9696 other downstream 926900 25859873 ~ 25860408 (-) False patl1
TU9033 other downstream 1071630 25714668 ~ 25715678 (-) False LOC122353196
TU10045 other upstream 3897 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other upstream 4157 26802170 ~ 26802925 (-) False c1h19orf53
TU10183 other upstream 399892 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 443211 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 956769 27754782 ~ 27939452 (-) False G7105

Expression Profile