Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043247696.1 |
| length | 647 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | atp5pf |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 2220888 ~ 2223969 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02131 | ATPeF0F6, ATP5J; F-type H+-transporting ATPase subunit 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU610 | lncRNA | upstream | 45272 | 2174322 ~ 2175616 (+) | True | G415 |
| TU599 | lncRNA | upstream | 101497 | 2119116 ~ 2119391 (+) | True | G408 |
| TU595 | lncRNA | upstream | 139068 | 2081472 ~ 2081820 (+) | True | G404 |
| TU481 | lncRNA | upstream | 269568 | 1936173 ~ 1951320 (+) | False | G320 |
| TU480 | lncRNA | upstream | 284241 | 1936173 ~ 1936647 (+) | True | G320 |
| TU654 | lncRNA | downstream | 51038 | 2275007 ~ 2275341 (+) | True | G450 |
| TU640 | lncRNA | downstream | 52023 | 2275992 ~ 2276271 (+) | True | G439 |
| TU668 | lncRNA | downstream | 99316 | 2323285 ~ 2327330 (+) | True | G457 |
| TU641 | lncRNA | downstream | 148746 | 2372715 ~ 2373156 (+) | True | G440 |
| TU681 | lncRNA | downstream | 196507 | 2420476 ~ 2421647 (+) | True | G463 |
| XM_043240464.1 | mRNA | upstream | 1152 | 2192921 ~ 2219736 (+) | True | appa |
| XM_043240634.1 | mRNA | upstream | 1152 | 2192922 ~ 2219736 (+) | False | appa |
| XM_043240715.1 | mRNA | upstream | 1152 | 2192922 ~ 2219736 (+) | False | appa |
| XM_043240548.1 | mRNA | upstream | 1152 | 2192924 ~ 2219736 (+) | False | appa |
| XM_043240785.1 | mRNA | upstream | 1152 | 2192925 ~ 2219736 (+) | False | appa |
| XM_043247943.1 | mRNA | downstream | 29650 | 2253619 ~ 2260025 (+) | True | LOC122351075 |
| XM_043247951.1 | mRNA | downstream | 30731 | 2254700 ~ 2260025 (+) | False | LOC122351075 |
| XM_043247934.1 | mRNA | downstream | 30731 | 2254700 ~ 2260025 (+) | False | LOC122351075 |
| XM_043236657.1 | mRNA | downstream | 48009 | 2271978 ~ 2274222 (+) | False | si:ch73-41e3.7 |
| XM_043236672.1 | mRNA | downstream | 48035 | 2272004 ~ 2274222 (+) | False | si:ch73-41e3.7 |
| TU616 | other | upstream | 28424 | 2185859 ~ 2192464 (+) | True | cyyr1 |
| TU311 | other | upstream | 779222 | 1439073 ~ 1441666 (+) | True | LOC122327253 |
| TU309 | other | upstream | 779449 | 1439073 ~ 1441439 (+) | False | LOC122327253 |
| TU310 | other | upstream | 779449 | 1439073 ~ 1441439 (+) | False | LOC122327253 |
| TU190 | other | upstream | 1100167 | 1119719 ~ 1120721 (+) | True | G136 |
| TU731 | other | downstream | 259704 | 2483673 ~ 2485988 (+) | False | grtp1a |
| TU718 | other | downstream | 287752 | 2511721 ~ 2513859 (+) | False | pcid2 |
| TU696 | other | downstream | 300556 | 2524525 ~ 2527244 (+) | True | G474 |
| TU717 | other | downstream | 370962 | 2594931 ~ 2596302 (+) | True | G482 |
| XR_006252051.1 | other | downstream | 518110 | 2742079 ~ 2742212 (+) | True | LOC122353699 |
