RNA id: XM_043249686.1


Basic Information

Item Value
RNA id XM_043249686.1
length 1830
RNA type mRNA
GC content 0.45
exon number 7
gene id anp32b
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15024645 ~ 15029358 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGATATAAACACAGGGTTGTGTGTTGACCTATAATTCAAGCTCCCCacataatgcatgcatttcaaaAGTCATAACACATATTATCATGTACGCACTACGTTACGTAGAATTAAACATATATGGGAGATTTGACAAATTTGACTTGAATTGCAACATTTAGACAAACTTTTGATGTCACATACTGTAATGCAGCACtgttcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagggttgCAGTGAGCGTCGTTGGCCAGAGATGGCGCTGTTGAGTATATATTTGTTTCAGTGCCGTTTCCCTCCATGGTTTCTGCTCTCCCAGAGTAACTTGGCGCTGGGCTCAGATCATTATACAGTCCCATATTCTCCCTCCATTAAGGCATCTTTCTACCTTTTGGGCTGAACAGAAATTCCTCCAGAACCCAAGAGGGAAGAGTCCAACTTTTGAGGGGCGATATGGACATGAAAAAGAGGATTCATTTGGAGCTGAGGAACAGGACACCATCTGATGTACGAGAACTTGTCCTTGATAACTGCAGATCAAATGAAGGGAAAATTGAAGGCCTCACAGCAGAATTTGTTAATCTTGAGTTTCTAAGTTTGATAAATGTTGGTCTACTCTCTGTCTCCAACCTCCCTAAACTCGGAAAACTTAAAAAGTTGGAACTCAGCGACAACAGAATCTCTGGTGGCCTTGATGTTTTAGCTGAAAAACTCCCCAATCTCACACATCTAAACCTAAGTGGCAACAAACTGAAAGACATCAGCACATTGGAACCCTTGaaaaAACTTGACCATTTGAAGAGTCTCGACCTTTTCAATTGCGAAGTCACAAACTTGAATGACTACCGGGAAAGCGTCTTTAAGCTCCTTCCGCAGCTCACATACCTAGATGGCTATGATCTGGATGACCGCGAGGCATCGGACTCTGACGGAGAAGTCGATGGAGATGGGGTCGACGACGACGATGAGGaaggagaagaggaggaggatgaagatggagaggaggaggagttcGACGAAGAGGAAgatgacgacgacgacgatgaaGATGAGGTTGAAGGCgaggaggatgatgaggatGGCAGTGGAGAGGATGAGGAGGAAGACTTTGGTCAAGATGGAGAAGtagaggatgatgaagatgacgacgacgacgacgatgatgaaGAAGAAGAGCAAGGAGGCAAGGGTGAGAAGAGAAAACGAGAAGCAGACGATgaagacgacgacgacgacgatgaGGAGGACGATTAAGAGCCAATGAACAACTCTGTTACCAACCCTACCCTCTCCTCCTTTTCAACAACCTGGCTATCCCATCAACCTTTCTACCCCTCCACAACTCCCCCCTTTACCCAAGCGCTAAGCTCCCTGTGGGGGCAAGACTGTACCGGACGGGTGGAGCTGTTCACATGGAGCCTACGAGCTGAACGAAAGCCTTCTGGATCGGTGGCTTGCTCAGCGTTCCACGAGTCCACTGTCAATCCCCTGCCCGTTTGTGTTTCAAAACCTCTATGGACTTCGGGGACTGGTATTTAGTTTTGGGTctgtgcttttaatattttgttgaaagtgttctttttctcctttctttttttttttttttttttttttttttgttgacatttcCTCCCCCTTTAGTTTATGTTCCAAATTTCCCAATAAGATTGCTATAGCAACTGTGTGACAAGCGGGCCATCATTTTAGTGGCAGCCTGTGGCGCAAATCAAGGTTGTAGctacatttttactttctgtAAGACAAAaactttgtaaataaaataacattttgtgctTTGCTCACTCTCCTA

Function

GO: NA

KEGG:

id description
K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU5112 lncRNA downstream 20357 15001285 ~ 15004288 (-) True G3546
TU5078 lncRNA downstream 105859 14898206 ~ 14918786 (-) False cxxc4
TU5052 lncRNA downstream 176069 14848025 ~ 14848576 (-) True G3502
XR_006249238.1 lncRNA downstream 250725 14772740 ~ 14773920 (-) True LOC122336348
XR_006249191.1 lncRNA downstream 251915 14771467 ~ 14772730 (-) True LOC122336242
TU5141 lncRNA upstream 199978 15229336 ~ 15229753 (-) True G3570
TU5143 lncRNA upstream 245526 15274884 ~ 15275311 (-) True G3572
TU5148 lncRNA upstream 274630 15303988 ~ 15306245 (-) True G3577
TU5149 lncRNA upstream 277290 15306648 ~ 15306904 (-) True G3578
TU5152 lncRNA upstream 280977 15310335 ~ 15310542 (-) True G3581
XM_043249976.1 mRNA downstream 45227 14976363 ~ 14979418 (-) True ints12
XM_043234883.1 mRNA downstream 61512 14959165 ~ 14963133 (-) True ppa2
XM_043227321.1 mRNA downstream 106029 14898201 ~ 14918616 (-) True cxxc4
XM_043228273.1 mRNA downstream 159512 14862844 ~ 14865133 (-) True cdkn2a/b
XM_043249651.1 mRNA upstream 3811 15033169 ~ 15037691 (-) True trmo
XM_043249659.1 mRNA upstream 3811 15033169 ~ 15037675 (-) False trmo
XM_043249668.1 mRNA upstream 3811 15033169 ~ 15037675 (-) False trmo
XM_043249675.1 mRNA upstream 3811 15033169 ~ 15037675 (-) False trmo
XM_043233686.1 mRNA upstream 21461 15050819 ~ 15052876 (-) True foxe1
TU5081 other downstream 99282 14925085 ~ 14925363 (-) True G3522
TU5035 other downstream 275670 14746829 ~ 14748975 (-) True G3491
TU4627 other downstream 1140409 13882278 ~ 13884236 (-) False LOC122350629
TU4632 other downstream 1182002 13841542 ~ 13842643 (-) False LOC122350606
unassigned_transcript_100 other downstream 1635320 13389253 ~ 13389325 (-) True trnar-ucg_69
TU5142 other upstream 201181 15230539 ~ 15230886 (-) True G3571
XR_006251556.1 other upstream 1039819 16069177 ~ 16073920 (-) False alg11
XR_006250498.1 other upstream 2786466 17815824 ~ 17880417 (-) False znf827
TU6528 other upstream 4506614 19535972 ~ 19539146 (-) True cdk2ap2
unassigned_transcript_102 other upstream 5067597 20096955 ~ 20097026 (-) True trnae-cuc_3

Expression Profile