RNA id: XM_043250806.1


Basic Information

Item Value
RNA id XM_043250806.1
length 1925
RNA type mRNA
GC content 0.44
exon number 9
gene id LOC122352989
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27975280 ~ 27978821 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTTTCAGGGTTTCTAGTGATAGTGATTTTAAAGTGGACTACTGTTATTCACGCATTTGTGCACTAATGAACTCATCAGTGACAATAAGATGCAATTATGAATACCCTCCTGGACATCAGATCAAGAAAGTGTTCTGGACCAAAGGACCTATGATAAAGAATACAGAGCCTCCAGATCTGTCTGAGGACCCTGAATACAGTCAGAGGTTTCAGTATCTGGGAGATAAAAGAAGATGCACCATGAGACTgagtcatgtgacacagaaagaTGAACACAAGTACTATTTCAGATTCATCACTGATAAACCTGGTGGAAAATACACTGGTCGTTCAGGAGTGACTCTTACTGTGACAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGCTCTACAGGAACGCAATCACTATCTCAGATCACCTGATGTTCAGCTTAATGTCACATaCCCACCAAAGAGTGTCTCAGTGTCCATCATTCCATCTGAAATAGGAggagattcagtgactctgatctgcagcagtgacTCAAACCCACCTGCAGAAATCAGCTGGATTAAAGGAGGAACAACTGTAGGATCTGGAAGAATCTACAACATCTCAAAGATCAGATCTGATCACAGTGGAGAATACAAGTGCAAGTCCAGAAATGAACATGGAGAGAAATACTCTGAAGCTGTGACTTTGAACATCATGTACCCACCCAGGAACGTCTCAGTGTTCATGAATGGATCTGGTGAAATAGTGGAGGAagattcagtgactctgatctgcagcagtgattcaaacccacctgcTCTGAACTTCTTCTGGTTTAAGGAGAATCAAAGCTCATCTGTTGGATCTGGACAGAGTTTCAGTGCACTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCAACACGGATCTCAGAGATCAGACGCTGTTTCTGTCACTGTTAAAGAAAGAGGTAAAGCAGTCCTGTACGCAGCTATAGCGTTCGCAGCGGATGTGGAGTTTTACTCCTTATCTTCATCCTAGTGCTCGCAAGGTGACCTCTTAGCTTTTAATGATGGTGTGCTCGTTAATGGTTATGAATGTGTTCACATGCTTATCTTTGTACTACAGGAAGGCAAAAGGCTTTTCTTCAGATGTCAGACAGAAGCAGGTTCAACAAGCTTCCAGCTCTGAAGATGACGGGCTGTATGACAGAGTTACTCCCAACACACCCGAGCAGATCCCGCTGTGGGACAGGCTACAAATATAACGTACTCAACCGTCCAACATGTCACAAACATTAAAACCATCTACGAGAATATTAGAGTGCACCATACTGACTCTGCTGCGAGATCCGATACGATGGAGGGTACCTCAGTGGTTTACAGCAGAGCCAAGTGATCCAGGACCCTTCGCGGGGATTGAAAATGACGCTGGGCTCCAGCTGAGTGTAAATATATAGTAGCTGCTGCAGCTTTGAATCAGATGTTTCTATGTGTGTCGAGACGTTTCTCCCTGTCAGTCGTTGAACAGGAAGCACTGATCAGACGCATTGGTACAGCGTGGTGGTTATTTACATCATTGCTTTGAGACTGTGGTTTGTGATCTGGGAAGTTATCATCCACCGCTAGCCGCATGCATACGCCTGTGgacacattttctgttttgtaacatttccGAAGATTTGCGTAATTTTCCGTAAATAGACGTTTCAGTTTTAGCCTACACGTCTTACACGTTTCATAAAACAATGTTTGATGCTTTGACACTGAATCATTTCATGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10461 lncRNA downstream 3070 27790801 ~ 27972210 (-) True G7128
TU10456 lncRNA downstream 3781 27924414 ~ 27971499 (-) True G7127
TU10524 lncRNA downstream 10646 27961915 ~ 27964634 (-) True G7157
TU10451 lncRNA downstream 13982 27781113 ~ 27961298 (-) True G7125
TU10523 lncRNA downstream 17281 27956825 ~ 27957999 (-) True G7156
TU10548 lncRNA upstream 95096 28073917 ~ 28074306 (-) False LOC122349330
TU10557 lncRNA upstream 130861 28109682 ~ 28114927 (-) True G7182
TU10636 lncRNA upstream 243435 28222256 ~ 28223230 (-) False nxnl1
TU10641 lncRNA upstream 260035 28238856 ~ 28239695 (-) True G7238
TU11036 lncRNA upstream 285576 28264397 ~ 28285334 (-) True G7480
XM_043245266.1 mRNA downstream 33011 27940743 ~ 27942269 (-) True LOC122349282
XM_043245253.1 mRNA downstream 84704 27887819 ~ 27890576 (-) True LOC122349272
XM_043250498.1 mRNA downstream 172231 27794470 ~ 27803049 (-) True LOC122352815
XM_043250545.1 mRNA downstream 210274 27759218 ~ 27765006 (-) False LOC122352823
XM_043250640.1 mRNA upstream 17590 27996411 ~ 27997642 (-) True LOC122352890
XM_043245297.1 mRNA upstream 20533 27999354 ~ 28026817 (-) True LOC122349305
XM_043250448.1 mRNA upstream 49329 28028150 ~ 28034318 (-) True LOC122352793
XM_043250458.1 mRNA upstream 49329 28028150 ~ 28034313 (-) False LOC122352793
XM_043250829.1 mRNA upstream 64997 28043818 ~ 28045173 (-) True LOC122353000
TU10417 other downstream 35828 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 35828 27754782 ~ 27939452 (-) False G7105
XR_006250838.1 other downstream 720213 27241224 ~ 27255067 (-) False LOC122343833
TU10183 other downstream 772713 27197905 ~ 27202567 (-) False LOC122344379
TU10046 other downstream 1172355 26802170 ~ 26802925 (-) False c1h19orf53
TU10496 other upstream 95827 28074648 ~ 28076444 (-) False LOC122349330
TU11020 other upstream 265307 28244128 ~ 28248523 (-) True G7475
TU11081 other upstream 412218 28391039 ~ 28392053 (-) True G7508
TU11094 other upstream 427361 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 544884 28523705 ~ 28525551 (-) True G7527

Expression Profile