Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043251139.1 |
| length | 1249 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 9 |
| gene id | aptx |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 25809879 ~ 25813849 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006281 | DNA repair | biological_process |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0005730 | nucleolus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| K10863 | APTX; aprataxin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU9628 | lncRNA | downstream | 10606 | 25768907 ~ 25799273 (-) | True | G6594 |
| TU9062 | lncRNA | downstream | 72567 | 25736797 ~ 25737312 (-) | True | G6223 |
| TU9030 | lncRNA | downstream | 188134 | 25621434 ~ 25621745 (-) | True | G6201 |
| TU9029 | lncRNA | downstream | 189375 | 25620246 ~ 25620504 (-) | True | G6200 |
| TU8988 | lncRNA | downstream | 305025 | 25503940 ~ 25504854 (-) | True | G6165 |
| TU9685 | lncRNA | upstream | 17475 | 25831324 ~ 25858605 (-) | False | patl1 |
| TU9689 | lncRNA | upstream | 22089 | 25835938 ~ 25844994 (-) | True | G6634 |
| TU9691 | lncRNA | upstream | 25002 | 25838851 ~ 25846530 (-) | True | G6636 |
| TU9693 | lncRNA | upstream | 43726 | 25857575 ~ 25858204 (-) | False | patl1 |
| TU9713 | lncRNA | upstream | 104721 | 25918570 ~ 25918785 (-) | True | G6650 |
| XM_043251183.1 | mRNA | downstream | 82341 | 25716158 ~ 25727538 (-) | True | LOC122353214 |
| XM_043251160.1 | mRNA | downstream | 94175 | 25714930 ~ 25715704 (-) | False | LOC122353196 |
| XM_043251204.1 | mRNA | downstream | 95905 | 25706824 ~ 25713974 (-) | True | LOC122353232 |
| XM_043245021.1 | mRNA | downstream | 108595 | 25687797 ~ 25701284 (-) | True | LOC122349099 |
| XM_043234897.1 | mRNA | downstream | 231080 | 25577222 ~ 25578799 (-) | True | junba |
| XM_043245059.1 | mRNA | upstream | 43789 | 25857638 ~ 25863787 (-) | True | patl1 |
| XM_043237101.1 | mRNA | upstream | 255327 | 26069176 ~ 26076862 (-) | True | il15 |
| XM_043237109.1 | mRNA | upstream | 255327 | 26069176 ~ 26076861 (-) | False | il15 |
| XM_043237118.1 | mRNA | upstream | 255327 | 26069176 ~ 26076857 (-) | False | il15 |
| XM_043237092.1 | mRNA | upstream | 255327 | 26069176 ~ 26076856 (-) | False | il15 |
| TU9035 | other | downstream | 94201 | 25714102 ~ 25715678 (-) | True | LOC122353196 |
| TU9033 | other | downstream | 94201 | 25714668 ~ 25715678 (-) | False | LOC122353196 |
| TU9017 | other | downstream | 254644 | 25551749 ~ 25555235 (-) | False | prokr1a |
| TU8940 | other | downstream | 407524 | 25401314 ~ 25402355 (-) | False | G6135 |
| TU8935 | other | downstream | 409862 | 25398491 ~ 25400017 (-) | False | G6134 |
| TU9696 | other | upstream | 46024 | 25859873 ~ 25860408 (-) | False | patl1 |
| TU9622 | other | upstream | 316939 | 26130788 ~ 26135486 (-) | False | G6592 |
| TU9833 | other | upstream | 603010 | 26416859 ~ 26417879 (-) | False | smdt1b |
| TU9834 | other | upstream | 603034 | 26416883 ~ 26417879 (-) | False | smdt1b |
| TU10045 | other | upstream | 988061 | 26801910 ~ 26802925 (-) | True | c1h19orf53 |
