RNA id: XM_043251220.1


Basic Information

Item Value
RNA id XM_043251220.1
length 2115
RNA type mRNA
GC content 0.44
exon number 14
gene id map9
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14615314 ~ 14623229 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGTAGGATCGGTACGTTCTTACCCGGTAGTTGCTTTGGTAACTCGCGTAAACAAATGGCGTCTAAGATGACCTGAGCAGCGCTTGCTACTGATCATTTGTTTTGAAGCTAGGGTGTGTTTGATGAGATGGACGACGAGCCTTTTTCTACAACGCTTGCATATACGAAAAGCCCTAAAACATCCAGAAGAACAACTTTTCAGGATGAGCTGAAGAAAGCTGTGTCTGCTAGAGCTAACAGGCACAGTTACTCTGATGACTTtgacgatgatgatgaagatggtAAAGATAGTGATGATGACGACATACTTAACAAACTCCTTAAGACccaaaaacagaagaaagagagaTTTAAAGCTGGAAAGACGAAAGGCAAAATCAACGATTTCAAGCTTTCAGATGACGAAGAGGAAAATGTCAAACCCAAAAAAGTGTCTTTTGTGAAAACCAAAAGAACCAGCTCTCCTGTGCACTTTGATCAGCTGAACAGCACAGGAAGTGCAGACGACCAGCCTAGTTCTCTCCATTTCACCCAGTCCAGGCATACCTCTCAAAGTTCAAGCAATTCTCACGCTCCAGAGAAAAACCAACAGTCAGATTCCTCCTTTTCCTCCCTATCTGACAAGTTTCAACCAGGATCCAGTTTACTCCAGAAGGAAGAACAGTTAAAATCAATAACAAAGCTGAGGAAGAGCCTGTCAGAATCTCCGTTGCCTCTAAACTCGGAGAATAGCCAATGGGAGTCGTCCGTCCCTCTTACATCAGATGGCTCACAGTGGGACAGTCCATTGCCTTTGCCTTCAGAAAAAAATGAGCATAACCAAATGACTGGTAAAGATGGTGAACTGCCCGTTCCTCAACCCAGGGAGAGAAGTGTTAAACCAAAACTCCCTACAGGTTGTCTTGCTCAAGACACGTCACCCAGACCCAAACCCAGGCAGAGGACAGCAAACACGTGTGACACTGGTCAGTTAGAAGAGGAAACACAAGCAGAGACCACTGCCTGCAGCAGAACAGCCACATCCTCTATGTCTATAGCCCTCTCCAACACATTCTCTACTGAGAAGAGTCAAACCTCTACCAATGACAGCGTTCTGAGTCCAGATGAGGACCAGGCGATGTCGGAAAAGTCCAAGACACAGTCTTCTTCAACAGCAGAGCAAATATTCCAGTTTCCGGACACTGTGGGCAGTGCCGCCACAGAAGAGAGCAAAGAGAGAAATTACTCAACATCTTTTGAAGAGAAGCATGAGATTTCCCAGGGTGATCTAGACCGAATGTCTAGGAAATCAACGGACAGACCTTCAAGCTCTCGCTCATCCAGTGCCAGAAAATCCAAGAGCTCATATACAGCGGAGTCTAAATACCTGGGAACATTGAAGGTTTTGGATCAGAGGACTCAGGAGACCCAACTGCTTCCAGAAGCAGCAGATTCACTAAGAGCTGCTGTGTATCAGGAATggctaaaaaagaaagaagaaactttaaaaataacaaggAAGGCAAAAAAGCAGGAAGAGAAATCTAAAGAGGAGAGGATGCAAGAGGAAAGGCTTGCTAAAATTGCAGATGCAAAGGCTTCTTATGATGcctggaaagagaaaaaaagtgaagtcATCAAAAAAAACGTCAAAGAAAAGCAGGAGGCAGTCAAGCAACAACAAATGGAAATGGATAAAAAGCACGAAAAAAAGGAAACCGCAAAACaggTTTTTGAGAAGTGGAAAGAGGAGCATGATGGTATCCTGAAAGACAGAATAAGGCAAAAGAAACAGACTGAGAGAAGACAGAAACTACAGCAGGtcaaagagaaagaagagaggaAGAAGGACTCTATCTCTGCATTCGCTGAATGGAGTGACCAAAAGAAAGATGTTATTGAAGAGAAGATAAGGGCAGAGCGCAGGAAAGAGAAGATAAAGGAAGTGGAGGAGAAATATgaaaaggaggaaaaagaaaaaatggccTTGGAGATGTATGAGAAATGGCTGaaaagaaaagagtttcaacaaaaaagagagcaaaatgAAAAGAGGATACAGGCTATTCTTCAAGATGagccccctccaccctggagccCACCTAATAAAACTATACCATTTGGAAAATGAGcgtta

Function

GO:

id name namespace
GO:0000910 cytokinesis biological_process
GO:0051225 spindle assembly biological_process
GO:0007088 regulation of mitotic nuclear division biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU4808 lncRNA downstream 4528 14610497 ~ 14610786 (-) True G3357
TU4745 lncRNA downstream 123676 14490724 ~ 14491638 (-) True G3318
TU4679 lncRNA downstream 202339 14412767 ~ 14412975 (-) True G3266
XR_006251753.1 lncRNA downstream 347529 14249605 ~ 14267785 (-) True LOC122351408
TU4640 lncRNA downstream 646534 13961708 ~ 13968780 (-) True G3232
TU5004 lncRNA upstream 15446 14635694 ~ 14636587 (-) True G3475
TU4985 lncRNA upstream 41226 14661474 ~ 14687860 (-) False usp53b
TU4986 lncRNA upstream 41226 14661474 ~ 14663417 (-) False usp53b
TU4987 lncRNA upstream 41226 14661474 ~ 14687860 (-) False usp53b
TU5001 lncRNA upstream 66368 14686616 ~ 14714546 (-) False myoz2b
XM_043246123.1 mRNA downstream 18828 14592215 ~ 14596486 (-) True fgg
XM_043257370.1 mRNA downstream 33093 14554871 ~ 14582221 (-) True dchs2
XM_043241031.1 mRNA downstream 74868 14536730 ~ 14540446 (-) True sfrp2
XM_043243358.1 mRNA downstream 84746 14522289 ~ 14530568 (-) True arfip1
XM_043236644.1 mRNA downstream 94356 14500218 ~ 14520958 (-) True fhdc1
XM_043248985.1 mRNA upstream 43030 14663278 ~ 14684861 (-) False usp53b
XM_043248738.1 mRNA upstream 43030 14663278 ~ 14684860 (-) True usp53b
XM_043248892.1 mRNA upstream 43030 14663278 ~ 14684355 (-) False usp53b
XM_043248823.1 mRNA upstream 43030 14663278 ~ 14684353 (-) False usp53b
XM_043250189.1 mRNA upstream 66348 14686596 ~ 14692364 (-) True myoz2b
TU4627 other downstream 731078 13882278 ~ 13884236 (-) False LOC122350629
TU4632 other downstream 772671 13841542 ~ 13842643 (-) False LOC122350606
unassigned_transcript_100 other downstream 1225989 13389253 ~ 13389325 (-) True trnar-ucg_69
unassigned_transcript_99 other downstream 1226808 13388434 ~ 13388506 (-) True trnar-ucg_68
TU4412 other downstream 1323591 13291296 ~ 13291723 (-) True G3072
TU5035 other upstream 126581 14746829 ~ 14748975 (-) True G3491
TU5081 other upstream 304837 14925085 ~ 14925363 (-) True G3522
TU5072 other upstream 400394 15020642 ~ 15029620 (-) True G3515
TU5142 other upstream 610291 15230539 ~ 15230886 (-) True G3571
XR_006251556.1 other upstream 1448929 16069177 ~ 16073920 (-) False alg11

Expression Profile