RNA id: XM_043262421.1


Basic Information

Item Value
RNA id XM_043262421.1
length 1921
RNA type mRNA
GC content 0.53
exon number 6
gene id lpar2b
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29184982 ~ 29195477 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGCCCCGCCCCCCGGAGCCGAGCGCAGGTGAGCGCGCCCGTGAACTCGACGGCGGCGGAGAGCGCGAGCGGAGCAGCGACATGAGACTCGGTCCGACGCGACCGGACTGAGCTGAACGGCACCGAGCGCACCTAGATCTGGCTCCATGAGTGACCCCTGACCCGTAAAGCTCCTCCCCTCCAGTCGTTCCCGTCCAATCGCAAGCTTCACCATGGTTTGCTACTACAACGAGAGCATAAAGTTCTTCTACGACCTCAGTAAGAAGAACATCAGCGACACGTGGAGGTCCAAAGATGTGGTGGTGGTGACTCTGGGCCTGCTGGTCTGCACCATCGTCATCTTCACCAACATCCTGGTCATGTTGGCCATCTTCATGAACCGCAGGTTCCACTACCCCATCTACTACCTGCTGGGGAACCTGGCGGCCGCCGACCTGTTCGCCGGCATCTCCTACCTGTACCTGATGTTCCACACGGGCCCCTGGACCATCAAGCTCTCCGTCTACGAGTGGTTCGTGAGACAGGGTTTGATCGACACCAGTCTGACGGCCTCCGTCATCAATCTGATGGCCATCGCGCTGGAGCGCCACCAGACCATCTTCACCATGCAGCTGCACAGCAAGATGACCAACCACCGGGTGGTGCTGCTGATCGCGGGCATCTGGGTCATCGCCATCGTGATGGGTTTGGTGCCCGCTATGGGCTGGAGCTGCGTCTGCAACATCCTGCAGTGCTCCAACATGGCGCCGCTCTACAGCCGCAGCTACCTGGTGTTCTGGGCCGTGCTCAACCTGCTGACCTTCACCGTCATGGTGGCCGTCTACACGCGCATCTTCGTCTACGTGCGCCGCAAGAGCCACCGCATGAGCCAGCACACCTCGCAGGTCAAGCACAAGGAGACGGTGGTCAACCTCATGAAGACCGTCGTCATGATCCTGGGGTGTTTCGTGGTCTGCTGGACGCCGGGTCTGGTTCTCCTGCTCCTGGACGGTCTGTGTAAGTCCTGCAACGTCCTGACCTACGAGAAGTTCTTCCTGGTGTTGGCCGAGTGCAACTCCTTCATGAACCCCATCATCTACTCGTACCGCGACAAGGACATGCGCGACACCTTCAAGCGCATCCTGTGCTTCCCGTGTCTGGGCTCGCGGCAGAAGGGCGAGCACTCGGGCGTCCGCTTCAACACCCTCGAGCAAGAGCGGAGACGGCGCGTGCTGCAGGAGTCATGGGTCgcTCGTAAGGCCCGTGAAGGAGACGGAGCGCAGGCTAACGGAGGACAGGTCGCACTGAAGGACGCCGAGGACATGCTGGACTCCACCGAGAGCTGAGGAACGTGAAGCAGAAGGATCCGCTCCGTGCAGTGTGCTGATTGGCCGAAGGAGCCGTCAATCACTCCCTGCGCATTTGAATGGGCATCAAATGAAGAGACCGTGTGTTGAGCTGTAACTGTGAATGAGTTTGTTGTAAATacgctttttatttaattaaagttttaccGGTGGAGTTTATAcatgttcttttgttttattattttaaaaacatgactgACGTTTTTTACGATGCCAACTTTTCCGCTGCCCAATACTGATTCAATTTCAGCGTTCTTGAAAACAAGTAAGCAAATGCGTTTCTCAGGTAATGTCAGAATGCAAGTAAACCAGAACAAATTTGTGTAGTCTTTGCTtatttcaagctttttttttttttgtaaataattgtacatttaattgtTGATGTAACTCCATGCAAACCCAGTAAGGCAATCATTtgttaaaatttaattgaaatattaaaatcttttgaGCTACGCTATATACAGCCAACCGGATGTGATGTATTTCTGTGTAAAACGTCTTTTTGAAATGacttctttatatttatttacactgaaCATCCCTAGTAAACACAGCACGCTTGGTCTCCC

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0001525 angiogenesis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0070915 lysophosphatidic acid receptor activity molecular_function

KEGG:

id description
K04291 LPAR2, EDG4; lysophosphatidic acid receptor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11200 lncRNA downstream 26264 29156844 ~ 29158718 (-) True G7574
TU11224 lncRNA downstream 32437 29132468 ~ 29152545 (-) False LOC122362981
TU11169 lncRNA downstream 52890 29119003 ~ 29132092 (-) False G7563
TU11167 lncRNA downstream 53035 29115018 ~ 29131947 (-) False G7563
TU11289 lncRNA upstream 95284 29290761 ~ 29291343 (-) True G7620
TU11294 lncRNA upstream 97149 29292626 ~ 29293410 (-) True G7624
TU11194 lncRNA upstream 106330 29301807 ~ 29302889 (-) False G7569
TU11303 lncRNA upstream 122104 29317581 ~ 29318226 (-) True G7629
TU11316 lncRNA upstream 151745 29347222 ~ 29347629 (-) True G7637
XM_043253734.1 mRNA downstream 2294 29170642 ~ 29182688 (-) False LOC122355388
XM_043253649.1 mRNA downstream 2294 29170642 ~ 29182688 (-) True LOC122355388
XM_043260324.1 mRNA downstream 15083 29165102 ~ 29169899 (-) True wu:fk65c09
XM_043264977.1 mRNA downstream 43959 29139442 ~ 29141023 (-) True LOC122363056
XM_043264857.1 mRNA downstream 47907 29133944 ~ 29137075 (-) True LOC122362981
XM_043258766.1 mRNA upstream 1704 29197181 ~ 29203914 (-) False akap8l
XM_043258688.1 mRNA upstream 1704 29197181 ~ 29203914 (-) True akap8l
XM_043263483.1 mRNA upstream 8666 29204143 ~ 29208413 (-) True mvb12a
XM_043220643.1 mRNA upstream 12989 29208466 ~ 29215399 (-) True olfm2b
XM_043253082.1 mRNA upstream 21504 29216981 ~ 29240840 (-) False col5a3b
TU11178 other downstream 56207 29049743 ~ 29128775 (-) False G7563
TU11193 other upstream 106330 29301807 ~ 29310598 (-) True G7569
TU11395 other upstream 230817 29426294 ~ 29434213 (-) False LOC122354733
TU11364 other upstream 250474 29445951 ~ 29461849 (-) False G7648
TU11407 other upstream 257282 29452759 ~ 29475388 (-) True G7655
TU11359 other upstream 262038 29457515 ~ 29473561 (-) True G7648

Expression Profile