RNA id: XR_006247499.1



Basic Information


Item Value
RNA id XR_006247499.1
length 249
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id LOC122326670
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29454380 ~ 29454905 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGTGCAGGCTCTCAGTCATCAAGCGTCCCTCATGGACGTGAGGCATCAACGGCTCGTCTTCAGCGATTTTGTCCATCCCTTCCTCTCGAGAGATGACCTAACAGATCCTGCCTGTCTTACCAAAACTACGAGCAGCGCTGACTGGCTGGAGAAGAACTTTGGCAACTTCTCCGTCTACGCGAGCTTGGAGGATTTGAAGACGCTGAATGCAAATTTCTCCAGCTTTGATTCGTTGGGGCTGCTGAGCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11385 lncRNA downstream 792 29445951 ~ 29453588 (-) False G7648
TU11382 lncRNA downstream 792 29449541 ~ 29453588 (-) False G7648
TU11358 lncRNA downstream 21234 29425501 ~ 29433146 (-) False LOC122354733
XR_006247528.1 lncRNA downstream 23623 29430416 ~ 29430757 (-) True LOC122326869
TU11355 lncRNA downstream 24830 29425501 ~ 29429550 (-) False LOC122354733
XR_006247465.1 lncRNA upstream 229 29455134 ~ 29455875 (-) True LOC122326309
XR_006247488.1 lncRNA upstream 1087 29455992 ~ 29456539 (-) True LOC122326490
XR_006247477.1 lncRNA upstream 7475 29462380 ~ 29463055 (-) True LOC122326391
TU11409 lncRNA upstream 8625 29463530 ~ 29464072 (-) True G7656
XR_006247472.1 lncRNA upstream 11030 29465935 ~ 29466645 (-) True LOC122326350
XM_043252980.1 mRNA downstream 27646 29411107 ~ 29426734 (-) True LOC122354733
XM_043252743.1 mRNA downstream 52002 29366477 ~ 29402378 (-) True mslnb
XM_043252815.1 mRNA downstream 57803 29366477 ~ 29396577 (-) False mslnb
XM_043259965.1 mRNA downstream 113809 29335596 ~ 29340571 (-) True LOC122359579
XM_043259600.1 mRNA downstream 127842 29320391 ~ 29326538 (-) True LOC122359260
XM_043245627.1 mRNA upstream 15439 29470344 ~ 29472287 (-) True LOC122349539
XM_043245639.1 mRNA upstream 17395 29472300 ~ 29476081 (-) True LOC122349546
XM_043253878.1 mRNA upstream 47600 29502505 ~ 29518876 (-) True zmp:0000001082
XM_043245650.1 mRNA upstream 64989 29519894 ~ 29523243 (-) True wfikkn1
XM_043260095.1 mRNA upstream 135058 29589963 ~ 29594827 (-) False ears2
TU11395 other downstream 20167 29426294 ~ 29434213 (-) False LOC122354733
TU11193 other downstream 143782 29301807 ~ 29310598 (-) True G7569
TU11164 other downstream 325605 29126771 ~ 29128775 (-) False G7563
TU11174 other downstream 325605 29126771 ~ 29128775 (-) False G7563
TU11196 other downstream 341646 29106314 ~ 29112734 (-) True LOC122325037
TU11359 other upstream 2610 29457515 ~ 29473561 (-) True G7648
TU11367 other upstream 2610 29457515 ~ 29473561 (-) False G7648
TU11370 other upstream 9348 29464253 ~ 29471799 (-) False G7648
TU11406 other upstream 12220 29467125 ~ 29475388 (-) False G7655
TU11360 other upstream 13389 29468294 ~ 29473561 (-) False G7648