Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006251927.1 |
| length | 786 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC122352814 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 9051908 ~ 9053473 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006251869.1 | lncRNA | upstream | 20085 | 9030823 ~ 9031823 (+) | True | LOC122352408 |
| TU2882 | lncRNA | upstream | 309387 | 8740832 ~ 8742521 (+) | True | G1979 |
| TU2880 | lncRNA | upstream | 321514 | 8730057 ~ 8730394 (+) | True | G1977 |
| TU2873 | lncRNA | upstream | 337873 | 8712174 ~ 8714035 (+) | True | G1971 |
| TU2866 | lncRNA | upstream | 354498 | 8695957 ~ 8697410 (+) | True | G1968 |
| XR_006252042.1 | lncRNA | downstream | 8488 | 9061961 ~ 9062609 (+) | True | LOC122353659 |
| TU3114 | lncRNA | downstream | 730745 | 9784218 ~ 9787161 (+) | True | G2149 |
| TU3213 | lncRNA | downstream | 1025412 | 10078885 ~ 10079470 (+) | True | G2219 |
| TU3247 | lncRNA | downstream | 1319489 | 10372962 ~ 10373847 (+) | True | G2246 |
| TU3429 | lncRNA | downstream | 1774212 | 10827685 ~ 10829530 (+) | False | G2350 |
| XM_043250318.1 | mRNA | upstream | 6940 | 9043497 ~ 9044968 (+) | True | LOC122352717 |
| XM_043250406.1 | mRNA | upstream | 6940 | 9043497 ~ 9044968 (+) | False | LOC122352717 |
| XM_043246377.1 | mRNA | upstream | 249284 | 8800317 ~ 8802624 (+) | True | LOC122350130 |
| XM_043236629.1 | mRNA | upstream | 271744 | 8762139 ~ 8780164 (+) | True | LOC122342651 |
| XM_043228024.1 | mRNA | upstream | 346035 | 8700459 ~ 8705873 (+) | True | stim2a |
| XM_043247536.1 | mRNA | downstream | 144411 | 9197884 ~ 9229837 (+) | True | pcdh7a |
| XM_043247547.1 | mRNA | downstream | 180553 | 9234026 ~ 9236917 (+) | True | itln1 |
| XM_043238000.1 | mRNA | downstream | 184220 | 9237693 ~ 9252170 (+) | False | hgsnat |
| XM_043238008.1 | mRNA | downstream | 184465 | 9237938 ~ 9252170 (+) | True | hgsnat |
| XM_043238020.1 | mRNA | downstream | 199343 | 9252816 ~ 9264070 (+) | True | pi4k2b |
| TU3004 | other | upstream | 16308 | 9035086 ~ 9035600 (+) | True | G2063 |
| TU2886 | other | upstream | 273016 | 8771108 ~ 8778892 (+) | False | LOC122342651 |
| TU2848 | other | upstream | 350536 | 8700440 ~ 8701372 (+) | False | stim2a |
| TU2774 | other | upstream | 444194 | 8606828 ~ 8607714 (+) | False | cxcl8a |
| unassigned_transcript_3 | other | upstream | 588564 | 8463272 ~ 8463344 (+) | True | trnaa-agc_1 |
| TU3085 | other | downstream | 354932 | 9408405 ~ 9412437 (+) | True | G2125 |
| XR_006252046.1 | other | downstream | 741726 | 9795199 ~ 9795414 (+) | True | LOC122353673 |
| XR_006252048.1 | other | downstream | 742741 | 9796214 ~ 9796429 (+) | True | LOC122353681 |
| XR_006252049.1 | other | downstream | 743957 | 9797430 ~ 9797648 (+) | True | LOC122353686 |
| TU3224 | other | downstream | 1191684 | 10245157 ~ 10245578 (+) | True | G2230 |
