RNA id: unassigned_transcript_161



Basic Information


Item Value
RNA id unassigned_transcript_161
length 73
RNA type tRNA
GC content 0.61
exon number 1
gene id trnar-ucg_101
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30358079 ~ 30358151 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggcccagtggcctaatggataaggcatcagccttcggcgctgaggattgtgggttcgagtcccatctgggtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11674 lncRNA downstream 67042 30290710 ~ 30291037 (-) True G7824
TU11672 lncRNA downstream 73729 30283969 ~ 30284350 (-) True G7822
TU11667 lncRNA downstream 114755 30195990 ~ 30243324 (-) True G7817
TU11654 lncRNA downstream 173470 30176165 ~ 30184609 (-) False G7806
TU11663 lncRNA downstream 180131 30169979 ~ 30177948 (-) True G7813
TU11724 lncRNA upstream 105172 30463323 ~ 30523613 (-) True G7864
TU11725 lncRNA upstream 105172 30463323 ~ 30504689 (-) False G7864
TU11727 lncRNA upstream 201099 30559250 ~ 30559552 (-) True G7866
TU11736 lncRNA upstream 298305 30656456 ~ 30661467 (-) True G7874
TU11932 lncRNA upstream 484827 30842978 ~ 30843402 (-) True G7988
XM_043247390.1 mRNA downstream 33214 30323319 ~ 30324865 (-) True LOC122350704
XM_043246511.1 mRNA downstream 36096 30319081 ~ 30321983 (-) True LOC122350179
XM_043247807.1 mRNA downstream 44028 30307963 ~ 30314051 (-) True LOC122350995
XM_043249230.1 mRNA downstream 192729 30155709 ~ 30165350 (-) True LOC122351861
XM_043249238.1 mRNA downstream 196166 30155709 ~ 30161913 (-) False LOC122351861
XM_043245781.1 mRNA upstream 35757 30393908 ~ 30400631 (-) True LOC122349654
XM_043245788.1 mRNA upstream 43054 30401205 ~ 30424282 (-) True LOC122349663
XM_043239911.1 mRNA upstream 495885 30854036 ~ 30861383 (-) False gyg2
XM_043239904.1 mRNA upstream 495885 30854036 ~ 30861381 (-) True gyg2
XM_043239920.1 mRNA upstream 495885 30854036 ~ 30861378 (-) False gyg2
TU11666 other downstream 160231 30192201 ~ 30197848 (-) True G7816
TU11380 other downstream 881741 29475474 ~ 29476338 (-) False G7648
TU11406 other downstream 882691 29467125 ~ 29475388 (-) False G7655
TU11367 other downstream 884518 29457515 ~ 29473561 (-) False G7648
unassigned_transcript_162 other upstream 244 30358395 ~ 30358466 (-) True trnaq-uug_9
unassigned_transcript_163 other upstream 1669 30359820 ~ 30359892 (-) True trnar-ucg_102
unassigned_transcript_164 other upstream 2455 30360606 ~ 30360678 (-) True trnaq-uug_10
unassigned_transcript_165 other upstream 2771 30360922 ~ 30360994 (-) True trnar-ucg_103
unassigned_transcript_166 other upstream 3602 30361753 ~ 30361823 (-) True trnag-ucc