RNA id: unassigned_transcript_173



Basic Information


Item Value
RNA id unassigned_transcript_173
length 74
RNA type tRNA
GC content 0.53
exon number 1
gene id trnar-ucg_109
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30368605 ~ 30368678 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggcccagtggcctaatggataagagcatcagccttcggagctgaggattgtgggttcgagtcccatctgggtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11674 lncRNA downstream 77568 30290710 ~ 30291037 (-) True G7824
TU11672 lncRNA downstream 84255 30283969 ~ 30284350 (-) True G7822
TU11667 lncRNA downstream 125281 30195990 ~ 30243324 (-) True G7817
TU11654 lncRNA downstream 183996 30176165 ~ 30184609 (-) False G7806
TU11663 lncRNA downstream 190657 30169979 ~ 30177948 (-) True G7813
TU11724 lncRNA upstream 94645 30463323 ~ 30523613 (-) True G7864
TU11725 lncRNA upstream 94645 30463323 ~ 30504689 (-) False G7864
TU11727 lncRNA upstream 190572 30559250 ~ 30559552 (-) True G7866
TU11736 lncRNA upstream 287778 30656456 ~ 30661467 (-) True G7874
TU11932 lncRNA upstream 474300 30842978 ~ 30843402 (-) True G7988
XM_043247390.1 mRNA downstream 43740 30323319 ~ 30324865 (-) True LOC122350704
XM_043246511.1 mRNA downstream 46622 30319081 ~ 30321983 (-) True LOC122350179
XM_043247807.1 mRNA downstream 54554 30307963 ~ 30314051 (-) True LOC122350995
XM_043249238.1 mRNA downstream 206692 30155709 ~ 30161913 (-) False LOC122351861
XM_043245781.1 mRNA upstream 25230 30393908 ~ 30400631 (-) True LOC122349654
XM_043245788.1 mRNA upstream 32527 30401205 ~ 30424282 (-) True LOC122349663
XM_043239911.1 mRNA upstream 485358 30854036 ~ 30861383 (-) False gyg2
XM_043239904.1 mRNA upstream 485358 30854036 ~ 30861381 (-) True gyg2
XM_043239920.1 mRNA upstream 485358 30854036 ~ 30861378 (-) False gyg2
unassigned_transcript_172 other downstream 571 30367963 ~ 30368034 (-) True trnar-ucg_108
unassigned_transcript_171 other downstream 2107 30366427 ~ 30366498 (-) True trnar-ucg_107
unassigned_transcript_170 other downstream 2432 30366103 ~ 30366173 (-) True trnaq-uug_11
unassigned_transcript_169 other downstream 2757 30365776 ~ 30365848 (-) True trnar-ucg_106
unassigned_transcript_168 other downstream 3076 30365457 ~ 30365529 (-) True trnar-ucg_105
unassigned_transcript_174 other upstream 5003 30373681 ~ 30373751 (-) True trnaq-uug_12
unassigned_transcript_175 other upstream 5653 30374331 ~ 30374403 (-) True trnar-ucg_110
unassigned_transcript_176 other upstream 6435 30375113 ~ 30375186 (-) True trnar-ucg_111
unassigned_transcript_177 other upstream 7587 30376265 ~ 30376337 (-) True trnar-ccg_24
unassigned_transcript_178 other upstream 8952 30377630 ~ 30377702 (-) True trnar-ucg_112