RNA id: unassigned_transcript_179



Basic Information


Item Value
RNA id unassigned_transcript_179
length 73
RNA type tRNA
GC content 0.59
exon number 1
gene id trnar-ucg_113
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30379691 ~ 30379763 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggcccagtggcctaatggataaagcatcagccttcggagctgaggattgtgggttcgagtcccatctgggtca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11674 lncRNA downstream 88654 30290710 ~ 30291037 (-) True G7824
TU11672 lncRNA downstream 95341 30283969 ~ 30284350 (-) True G7822
TU11667 lncRNA downstream 136367 30195990 ~ 30243324 (-) True G7817
TU11654 lncRNA downstream 195082 30176165 ~ 30184609 (-) False G7806
TU11663 lncRNA downstream 201743 30169979 ~ 30177948 (-) True G7813
TU11724 lncRNA upstream 83560 30463323 ~ 30523613 (-) True G7864
TU11725 lncRNA upstream 83560 30463323 ~ 30504689 (-) False G7864
TU11727 lncRNA upstream 179487 30559250 ~ 30559552 (-) True G7866
TU11736 lncRNA upstream 276693 30656456 ~ 30661467 (-) True G7874
TU11932 lncRNA upstream 463215 30842978 ~ 30843402 (-) True G7988
XM_043247390.1 mRNA downstream 54826 30323319 ~ 30324865 (-) True LOC122350704
XM_043246511.1 mRNA downstream 57708 30319081 ~ 30321983 (-) True LOC122350179
XM_043247807.1 mRNA downstream 65640 30307963 ~ 30314051 (-) True LOC122350995
XM_043249238.1 mRNA downstream 217778 30155709 ~ 30161913 (-) False LOC122351861
XM_043245781.1 mRNA upstream 14145 30393908 ~ 30400631 (-) True LOC122349654
XM_043245788.1 mRNA upstream 21442 30401205 ~ 30424282 (-) True LOC122349663
XM_043239911.1 mRNA upstream 474273 30854036 ~ 30861383 (-) False gyg2
XM_043239904.1 mRNA upstream 474273 30854036 ~ 30861381 (-) True gyg2
XM_043239920.1 mRNA upstream 474273 30854036 ~ 30861378 (-) False gyg2
unassigned_transcript_178 other downstream 1989 30377630 ~ 30377702 (-) True trnar-ucg_112
unassigned_transcript_177 other downstream 3354 30376265 ~ 30376337 (-) True trnar-ccg_24
unassigned_transcript_176 other downstream 4505 30375113 ~ 30375186 (-) True trnar-ucg_111
unassigned_transcript_175 other downstream 5288 30374331 ~ 30374403 (-) True trnar-ucg_110
unassigned_transcript_174 other downstream 5940 30373681 ~ 30373751 (-) True trnaq-uug_12
unassigned_transcript_180 other upstream 1358 30381121 ~ 30381193 (-) True trnar-ucg_114
unassigned_transcript_181 other upstream 4968 30384731 ~ 30384801 (-) True trnae-uuc
unassigned_transcript_182 other upstream 5606 30385369 ~ 30385441 (-) True trnap-ugg_1
unassigned_transcript_183 other upstream 7032 30386795 ~ 30386866 (-) True trnap-ugg_2
TU11729 other upstream 250471 30630234 ~ 30630505 (-) True G7868