RNA id: unassigned_transcript_184



Basic Information


Item Value
RNA id unassigned_transcript_184
length 73
RNA type tRNA
GC content 0.63
exon number 2
gene id trnar-ucu_5
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30862870 ~ 30862961 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggctctgtggcgcaatggatagcgcATTGGACTTCTAattcaaaggttgtgggttcgagtcccaccaGAGTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11933 lncRNA downstream 18700 30843717 ~ 30844170 (-) True G7989
TU11932 lncRNA downstream 19468 30842978 ~ 30843402 (-) True G7988
TU11736 lncRNA downstream 201403 30656456 ~ 30661467 (-) True G7874
TU11727 lncRNA downstream 303318 30559250 ~ 30559552 (-) True G7866
TU11724 lncRNA downstream 339257 30463323 ~ 30523613 (-) True G7864
TU11965 lncRNA upstream 56584 30919545 ~ 30944969 (-) True G8008
TU11968 lncRNA upstream 80537 30943498 ~ 30957486 (-) True G8009
TU11964 lncRNA upstream 85886 30948847 ~ 31004114 (-) True G8007
TU12006 lncRNA upstream 314833 31177794 ~ 31180161 (-) True G8042
TU12021 lncRNA upstream 341066 31204027 ~ 31297841 (-) True G8054
XM_043239911.1 mRNA downstream 1487 30854036 ~ 30861383 (-) False gyg2
XM_043239904.1 mRNA downstream 1489 30854036 ~ 30861381 (-) True gyg2
XM_043239920.1 mRNA downstream 1492 30854036 ~ 30861378 (-) False gyg2
XM_043245788.1 mRNA downstream 438588 30401205 ~ 30424282 (-) True LOC122349663
XM_043245781.1 mRNA downstream 462239 30393908 ~ 30400631 (-) True LOC122349654
XM_043235422.1 mRNA upstream 3477 30866438 ~ 30873108 (-) True cd99
XM_043235895.1 mRNA upstream 73437 30936398 ~ 30941726 (-) True creb1a
XM_043236591.1 mRNA upstream 109828 30972789 ~ 30974161 (-) True cldng
XM_043245847.1 mRNA upstream 509535 31372496 ~ 31378539 (-) True LOC122349700
XM_043245858.1 mRNA upstream 521379 31384340 ~ 31393086 (-) True LOC122349710
TU11729 other downstream 232365 30630234 ~ 30630505 (-) True G7868
unassigned_transcript_183 other downstream 476004 30386795 ~ 30386866 (-) True trnap-ugg_2
unassigned_transcript_182 other downstream 477429 30385369 ~ 30385441 (-) True trnap-ugg_1
unassigned_transcript_181 other downstream 478069 30384731 ~ 30384801 (-) True trnae-uuc
unassigned_transcript_180 other downstream 481677 30381121 ~ 30381193 (-) True trnar-ucg_114
TU11966 other upstream 83128 30946089 ~ 30957486 (-) False G8009
TU12079 other upstream 669108 31532069 ~ 31537416 (-) True G8091
TU12077 other upstream 687225 31550186 ~ 31554035 (-) True G8089
TU12112 other upstream 759713 31622674 ~ 31625823 (-) False LOC122349741
TU12119 other upstream 759713 31622674 ~ 31626415 (-) False LOC122349741